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鉴定羟基质子,确定其交换动态,并对微晶体蛋白中的氢键进行表征。

Identification of hydroxyl protons, determination of their exchange dynamics, and characterization of hydrogen bonding in a microcrystallin protein.

机构信息

Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Berlin, Germany.

出版信息

J Am Chem Soc. 2010 Mar 10;132(9):3187-95. doi: 10.1021/ja910167q.

Abstract

Heteronuclear correlation experiments employing perdeuterated proteins enable the observation of all hydroxyl protons in a microcrystalline protein by MAS solid-state NMR. Dipolar-based sequences allow magnetization transfers that are >50 times faster compared to scalar-coupling-based sequences, which significantly facilitates their assignment. Hydroxyl exchange rates were measured using EXSY-type experiments. We find a biexponential decay behavior for those hydroxyl groups that are involved in side chain-side chain C-O-H...O horizontal lineC hydrogen bonds. The quantification of the distances between the hydroxyl proton and the carbon atoms in the hydrogen-bonding donor as well as acceptor group is achieved via a REDOR experiment. In combination with X-ray data and isotropic proton chemical shifts, availability of (1)H,(13)C distance information can aid in the quantitative description of the geometry of these hydrogen bonds. Similarly, correlations between backbone amide proton and carbonyl atoms are observed, which will be useful in the analysis of the registry of beta-strand arrangement in amyloid fibrils.

摘要

采用全氘代蛋白质的异核相关实验使 MAS 固态 NMR 能够观察到微晶体蛋白质中的所有羟基质子。基于偶极子的序列允许比基于标量耦合的序列快 >50 倍的磁化转移,这极大地促进了它们的分配。使用 EXSY 型实验测量了羟基交换速率。我们发现那些参与侧链-侧链 C-O-H...O 氢键的羟基表现出双指数衰减行为。通过 REDOR 实验实现了对氢键供体和受体基团中羟基质子与碳原子之间距离的定量。结合 X 射线数据和各向同性质子化学位移,可以帮助定量描述这些氢键的几何形状。同样,观察到了骨架酰胺质子和羰基原子之间的相关性,这将有助于分析淀粉样纤维中β-折叠排列的登记。

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