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不同地理来源的酿酒酵母相似菌株的基因组和表型比较。

Genomic and phenotypic comparison between similar wine yeast strains of Saccharomyces cerevisiae from different geographic origins.

机构信息

Departamento de Ciencia y Tecnología de los Alimentos, Universidad de Santiago de Chile (USACH), Santiago, Chile.

出版信息

J Appl Microbiol. 2010 May;108(5):1850-8. doi: 10.1111/j.1365-2672.2010.04689.x.

Abstract

AIMS

To study genomic and phenotypic changes in wine yeasts produced in short time periods analysing yeast strains possibly derived from commercial strains recently dispersed.

METHODS AND RESULTS

We conducted a genomic and phenotypic comparison between the commercial yeast strain EC1118 and two novel strains (LV CB and L-957) isolated from different wine areas industrially intervened <20 years ago. Molecular analysis by amplified fragment length polymorphism (AFLP) and RAPD-PCR was not able to distinguish between these strains. However, comparative genomic hybridization (aCGH) showed discrete DNA gains and losses that allowed unequivocal identification of the strains. Furthermore, analysis of aCGH data supports the hypothesis that strains LV CB and L-957 are derivatives from strain EC1118. Finally, scarce phenotypic differences in physiological and metabolic parameters were found among the strains.

CONCLUSION

The wine yeasts have a very dynamic genome that accumulates changes in short time periods. These changes permit the unique genomic identification of the strains.

SIGNIFICANCE AND IMPACT OF THE STUDY

This study permits the evaluation of microevolutive events in wine yeasts and its relationship with the phenotype in this species.

摘要

目的

通过分析可能源自最近扩散的商业菌株的酵母菌株,研究在短时间内产生的葡萄酒酵母的基因组和表型变化。

方法和结果

我们对商业酵母菌株 EC1118 与两个新型菌株(LV CB 和 L-957)进行了基因组和表型比较,这两个菌株于<20 年前从不同的葡萄酒产区工业分离出来。扩增片段长度多态性(AFLP)和随机扩增多态性 DNA(RAPD-PCR)的分子分析无法区分这些菌株。然而,比较基因组杂交(aCGH)显示出离散的 DNA 增益和丢失,从而能够明确鉴定这些菌株。此外,aCGH 数据分析支持了菌株 LV CB 和 L-957 是从菌株 EC1118 衍生而来的假设。最后,在生理和代谢参数方面发现菌株之间存在很少的表型差异。

结论

葡萄酒酵母具有非常动态的基因组,可在短时间内积累变化。这些变化允许对菌株进行独特的基因组鉴定。

研究意义和影响

本研究允许评估葡萄酒酵母中的微进化事件及其与该物种表型的关系。

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