文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

固定化蛋白质中 1H-14N 交叉弛豫的机制。

Mechanism of 1H-14N cross-relaxation in immobilized proteins.

机构信息

Biophysical Chemistry, Center for Molecular Protein Science, Lund University, SE-22100 Lund, Sweden.

出版信息

J Magn Reson. 2010 Apr;203(2):257-73. doi: 10.1016/j.jmr.2010.01.008. Epub 2010 Jan 25.


DOI:10.1016/j.jmr.2010.01.008
PMID:20163976
Abstract

A resonant enhancement of the water-1H relaxation rate at three distinct frequencies in the range 0.5-3 MHz has been observed in a variety of aqueous biological systems. These so-called quadrupole (Q) peaks have been linked to a dipolar flip-flop polarization transfer from 1H nuclei to rapidly relaxing amide 14N nuclei in rotationally immobilized proteins. While the Q-peak frequencies conform to the known amide 14N quadrupole coupling parameters, a molecular model that accounts for the intensity and shape of the Q peaks has not been available. Here, we present such a model and test it against an extensive set of Q-peak data from two fully hydrated crosslinked proteins under conditions of variable temperature, pH and H/D isotope composition. We propose that polarization transfer from bulk water to amide 14N occurs in three steps: from bulk water to a so-called intermediary proton via material diffusion/exchange, from intermediary to amide proton by cross-relaxation driven by exchange-mediated orientational randomization of their mutual dipole coupling, and from amide proton to 14N by resonant dipolar relaxation 'of the second kind', driven by 14N spin fluctuations, which, in turn, are induced by restricted rigid-body motions of the protein. An essentially equivalent description of the last step can be formulated in terms of coherent 1H-->14N polarization transfer followed by fast 14N relaxation. Using independent structural and kinetic information, we show that the Q peaks from these two proteins involve approximately 7 intermediary protons in internal water molecules and side-chain hydroxyl groups with residence times of order 10(-5) s. The model not only accounts quantitatively for the extensive data set, but also explains why Q peaks are hardly observed from gelatin gels.

摘要

在各种水生物系统中,已经观察到在 0.5-3 MHz 范围内三个不同频率的水-1H 弛豫率的共振增强。这些所谓的四极(Q)峰与来自旋转固定蛋白质中的快速弛豫酰胺 14N 核的偶极翻转-翻转极化转移有关。虽然 Q 峰频率符合已知的酰胺 14N 四极偶合参数,但没有可以解释 Q 峰强度和形状的分子模型。在这里,我们提出了这样的模型,并根据两个完全水合的交联蛋白质在不同温度、pH 值和 H/D 同位素组成条件下的大量 Q 峰数据对其进行了测试。我们提出,从体相水到酰胺 14N 的极化转移分三个步骤进行:通过物质扩散/交换从体相水到所谓的中间质子,通过由交换介导的它们相互偶极耦合的取向随机化驱动的交叉弛豫从中介质子到酰胺质子,以及通过由 14N 自旋波动驱动的共振偶极弛豫“第二类”,从酰胺质子到 14N,这反过来又由蛋白质的受限刚性体运动引起。最后一步可以用基本上等效的描述来表示,即通过内部水分子和侧链羟基中的 7 个中间质子的相干 1H->14N 极化转移,然后是快速的 14N 弛豫。利用独立的结构和动力学信息,我们表明这两种蛋白质的 Q 峰涉及内部水分子和侧链羟基中的大约 7 个中间质子,其停留时间约为 10(-5) s。该模型不仅定量地解释了广泛的数据集合,还解释了为什么 Q 峰几乎不会从明胶凝胶中观察到。

相似文献

[1]
Mechanism of 1H-14N cross-relaxation in immobilized proteins.

J Magn Reson. 2010-1-25

[2]
The quadrupole enhanced 1H spin-lattice relaxation of the amide proton in slow tumbling proteins.

Phys Chem Chem Phys. 2010-2-10

[3]
Theory of relaxation of mobile water protons induced by protein NH moieties, with application to rat heart muscle and calf lens homogenates.

Biophys J. 1988-1

[4]
Slow internal protein dynamics from water (1)H magnetic relaxation dispersion.

J Am Chem Soc. 2009-12-30

[5]
Anisotropic reorientation of 9-methylpurine and 7-methylpurine molecules in methanol solution studied by combining 13C and 14N nuclear spin relaxation data and quantum chemical calculations.

J Phys Chem A. 2007-2-22

[6]
Molecular theory of field-dependent proton spin-lattice relaxation in tissue.

Magn Reson Med. 2006-7

[7]
Probing amide bond nitrogens in solids using 14N NMR spectroscopy.

Solid State Nucl Magn Reson. 2008-5

[8]
Double resonance experiments in low magnetic field: dynamic polarization of protons by (14)N and measurement of low NQR frequencies.

J Magn Reson. 2009-8

[9]
Paramagnetic relaxation of protons in rotationally immobilized proteins.

J Chem Phys. 2006-4-7

[10]
14N Polarization Inversion Spin Exchange at Magic Angle (PISEMA).

J Magn Reson. 2009-1

引用本文的文献

[1]
Standoff detection of fentanyl hydrochloride via nuclear quadrupole resonance: A multimodality pursuit.

PNAS Nexus. 2025-7-1

[2]
Markers of low field NMR relaxation features of tissues.

Sci Rep. 2024-10-22

[3]
Water Dynamics in Highly Concentrated Protein Systems-Insight from Nuclear Magnetic Resonance Relaxometry.

Int J Mol Sci. 2023-2-17

[4]
Water Dynamics in Whey-Protein-Based Composite Hydrogels by Means of NMR Relaxometry.

Int J Mol Sci. 2021-9-7

[5]
Low-field and variable-field NMR relaxation studies of H2O and D2O molecular dynamics in articular cartilage.

PLoS One. 2021

[6]
A new method for investigating osteoarthritis using Fast Field-Cycling nuclear magnetic resonance.

Phys Med. 2021-8

[7]
Dynamics of Ionic Liquids in Confinement by Means of NMR Relaxometry-EMIM-FSI in a Silica Matrix as an Example.

Materials (Basel). 2020-9-30

[8]
Towards applying NMR relaxometry as a diagnostic tool for bone and soft tissue sarcomas: a pilot study.

Sci Rep. 2020-8-26

[9]
Dynamics of Solid Proteins by Means of Nuclear Magnetic Resonance Relaxometry.

Biomolecules. 2019-10-25

[10]
Use of FCC-NMRD relaxometry for early detection and characterization of ex-vivo murine breast cancer.

Sci Rep. 2019-3-15

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索