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从完整的小亚基核糖体 RNA 基因序列推断淡水鱼类锥体虫(动基体目)的系统发育位置。

Phylogenetic position of the freshwater fish trypanosome, Trypanosoma ophiocephali (Kinetoplastida) inferred from the complete small subunit ribosomal RNA gene sequence.

机构信息

College of Fisheries, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.

出版信息

Parasitol Res. 2010 Apr;106(5):1039-42. doi: 10.1007/s00436-010-1759-4. Epub 2010 Feb 23.

Abstract

The complete small subunit rRNA (SSrRNA) gene sequence (2,142 nucleotides) of the freshwater fish trypanosome Trypanosoma ophiocephali Chen (1964) was determined. The phylogenetic analysis deduced using neighbor-joining, maximum parsimony, and Bayesian methods demonstrated the existence of an "aquatic clade". T. ophiocephali was revealed to be a member of the freshwater fish trypanosomes and form the sister species with Trypanosoma siniperca and Trypanosoma sp. Carpio with high bootstrap values (98% MP, 100% NJ, 100% Bay). The high similarity of SSrRNA gene sequences and morphometric characters showed that T. ophiocephali, T. siniperca and T. sp. Carpio probably were the same species. The phylogenetic trees further suggested that Chinese freshwater fish trypanosome might be paraphyletic, and fish trypanosomes should have low host specificity.

摘要

已测定淡水鱼类锥体虫 Trypanosoma ophiocephali Chen(1964)的完整小亚基 rRNA(SSrRNA)基因序列(2142 个核苷酸)。基于邻接法、最大简约法和贝叶斯法的系统发育分析表明存在一个“水生支系”。锥体虫 T. ophiocephali 是淡水鱼类锥体虫的成员,与中华鲟锥体虫和鲤鱼锥体虫形成姐妹种,支持率高(最大简约法 98%,邻接法 100%,贝叶斯法 100%)。SSrRNA 基因序列和形态特征的高度相似表明,T. ophiocephali、T. siniperca 和 T. sp. Carpio 可能是同一物种。系统发育树进一步表明,中国淡水鱼类锥体虫可能是并系的,鱼类锥体虫的宿主特异性可能较低。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20ee/2848340/06549e3223a0/436_2010_1759_Fig1_HTML.jpg

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