Department of Molecular Biology and Biochemistry, University of California, Irvine, California 92697-3900, USA.
J Biol Chem. 2010 Apr 30;285(18):13616-20. doi: 10.1074/jbc.M110.104968. Epub 2010 Feb 23.
In the camphor monooxygenase system from Pseudomonas putida, the [2Fe-2S]-containing putidaredoxin (Pdx) shuttles electrons between the NADH-dependent putidaredoxin reductase (Pdr) and cytochrome P450(cam). The mechanism of the Pdr.Pdx redox couple has been investigated by a variety of techniques. One of the exceptions is x-ray crystallography as the native partners associate weakly and resist co-crystallization. Here, we present the 2.6-A x-ray structure of a catalytically active complex between Pdr and Pdx C73S/C85S chemically cross-linked via the Lys(409Pdr)-Glu(72Pdx) pair. The 365 A(2) Pdr-Pdx interface is predominantly hydrophobic with one central Arg(310Pdr)-Asp(38Pdx) salt bridge, likely assisting docking and orienting the partners optimally for electron transfer, and a few peripheral hydrogen bonds. A predicted 12-A-long electron transfer route between FAD and [2Fe-2S] includes flavin flanking Trp(330Pdr) and the iron ligand Cys(39Pdx). The x-ray model agrees well with the experimental and theoretical results and suggests that the linked Pdx must undergo complex movements during turnover to accommodate P450(cam), which could limit the Pdx-to-P450(cam) electron transfer reaction.
在假单胞菌属的樟脑单加氧酶系统中,含[2Fe-2S]的假单胞菌还原型细胞色素 c(Pdx)在依赖 NADH 的假单胞菌还原型细胞色素 c 还原酶(Pdr)和细胞色素 P450(cam)之间传递电子。通过各种技术研究了 Pdr.Pdx 氧化还原对的机制。一个例外是 X 射线晶体学,因为天然伴侣的结合较弱,难以共结晶。在这里,我们展示了通过赖氨酸(409Pdr)-谷氨酸(72Pdx)对化学交联的催化活性 Pdr 和 Pdx C73S/C85S 之间的 2.6-A X 射线结构。365 A(2)Pdr-Pdx 界面主要是疏水性的,有一个中央精氨酸(310Pdr)-天冬氨酸(38Pdx)盐桥,可能有助于对接并将伴侣最佳定向以进行电子转移,并具有一些外围氢键。在 FAD 和[2Fe-2S]之间预测有 12-A 长的电子转移途径,包括黄素侧翼色氨酸(330Pdr)和铁配体半胱氨酸(39Pdx)。X 射线模型与实验和理论结果非常吻合,并表明连接的 Pdx 在周转过程中必须经历复杂的运动以适应细胞色素 P450(cam),这可能限制 Pdx 到细胞色素 P450(cam)的电子转移反应。