Suppr超能文献

锂化半胱氨酸脱氨的能量学和机理。

Energetics and mechanism for the deamination of lithiated cysteine.

机构信息

Department of Chemistry, University of Utah, 315 S. 1400 E. Rm 2020, Salt Lake City, Utah 84112, USA.

出版信息

J Phys Chem B. 2010 Mar 25;114(11):3938-49. doi: 10.1021/jp911222j.

Abstract

Lithium cation complexes with cysteine (Cys) are collisionally activated with xenon in a guided ion beam tandem mass spectrometer and observed to deaminate in addition to loss of the intact amino acid. Source conditions are found to influence the cross sections for these processes considerably, a result interpreted in terms of two isomers, Li(+)(Cys) and (NH(3))Li(+)(C(3)H(4)O(2)S). Quantum chemical calculations at the B3LYP/6-311G(d,p) level are used to explore the reaction mechanism for this fragmentation process in detail. A complete reaction coordinate surface for the process is elucidated, including all intermediates and transition states. Theoretical molecular parameters for the two isomers and for the rate-limiting transition state for deamination of Li(+)(Cys) are then used to analyze the threshold energies in the experimental data, providing experimental measurements of the energies of the transition state and various products. These experimental energies are compared with single point energies calculated at three different levels, B3LYP, B3P86, and MP2(full), using the 6-311+G(2d,2p) basis set with geometries and zero point energies calculated at the B3LYP/6-311G(d,p) level, as well as with additional calculations using basis sets that include core correlation on lithium. Good agreement between experiment and theory suggests that the reaction mechanisms have been reasonably elucidated and identifies the C(3)H(4)O(2)S deamination product as thiirane-carboxylic acid.

摘要

锂离子与半胱氨酸(Cys)形成复合物,在引导离子束串联质谱仪中与氙气发生碰撞激活,除了失去完整的氨基酸外,还观察到脱氨反应。源条件被发现会极大地影响这些过程的截面,这一结果可以用两种异构体 Li(+)(Cys) 和 (NH(3))Li(+)(C(3)H(4)O(2)S) 来解释。在 B3LYP/6-311G(d,p) 水平上进行的量子化学计算被用于详细探讨这种碎裂过程的反应机制。阐明了完整的反应坐标表面,包括所有的中间体和过渡态。然后,使用这两种异构体和 Li(+)(Cys) 脱氨的速率限制过渡态的理论分子参数来分析实验数据中的阈值能量,提供了过渡态和各种产物的能量的实验测量值。将这些实验能量与在三个不同水平(B3LYP、B3P86 和 MP2(full))上计算的单点能量进行比较,使用 6-311+G(2d,2p) 基组,采用 B3LYP/6-311G(d,p) 水平计算的几何形状和零点能,以及使用包括锂核相关的基组的额外计算。实验与理论之间的良好一致性表明,反应机制已经得到了合理的阐明,并确定了 C(3)H(4)O(2)S 脱氨产物为硫代环丙烷羧酸。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验