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耳炎外耳炎患者耳拭子中分离的微球菌科 Auritidibacter ignavus 属新种,将 2008 年 Li 等人命名的 Yaniellaceae 家族成员转移到微球菌科并修订亚目微球菌的描述。

Auritidibacter ignavus gen. nov., sp. nov., of the family Micrococcaceae isolated from an ear swab of a man with otitis externa, transfer of the members of the family Yaniellaceae Li et al. 2008 to the family Micrococcaceae and emended description of the suborder Micrococcineae.

机构信息

Institut für Medizinische Mikrobiologie und Immunologie der Universität Bonn, Sigmund-Freud Straße 25, 53127 Bonn, Germany.

Kekulé-Institut für Organische Chemie und Biochemie der Universität Bonn, 53121 Bonn, Germany.

出版信息

Int J Syst Evol Microbiol. 2011 Feb;61(Pt 2):223-230. doi: 10.1099/ijs.0.019786-0. Epub 2010 Feb 26.

Abstract

A Gram-reaction-positive, aerobic, catalase-positive, non-spore-forming, rod-shaped bacterium designated IMMIB L-1656(T) was isolated from an ear swab of a man and characterized using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain IMMIB L-1656(T) is related to members of the family Micrococcaceae (<95.1 % sequence similarity). Anaylsis using different phylogenetic algorithms consistently grouped strain IMMIB L-1656(T) with members of the genus Yaniella. The organism posessed a cell-wall murein based on L-lysine (variation A4α, type L-Lys-Gly-L-Glu), MK-10 as the predominant menaquinone and long-chain cellular fatty acids of straight-chain and branched-chain saturated types (with iso-C(15 : 0) and anteiso-C(17 : 0) predominating). The polar lipids included diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol in addition to unknown glycolipids. The DNA G+C content was 59.7 mol%. Based on its distinctive genotypic and phenotypic characteristics, strain IMMIB L-1656(T) represents a novel species in a novel genus, for which the name Auritidibacter ignavus gen. nov., sp. nov. is proposed. We also propose that members of the family Yaniellaceae be transferred to the family Micrococcaceae with amendments to the description of the suborder Micrococcineae. The type strain of Auritidibacter ignavus is IMMIB L-1656(T) (=DSM 45359(T) =CCUG 57943(T)).

摘要

一株革兰氏阳性、需氧、过氧化氢酶阳性、不产芽孢、杆状的细菌,被命名为 IMMIB L-1656(T),从一名男子的耳拭子中分离得到,并采用多相分类法进行了特征描述。16S rRNA 基因序列分析表明,菌株 IMMIB L-1656(T)与微球菌科的成员密切相关(<95.1%序列相似性)。不同的系统发育算法分析一致将菌株 IMMIB L-1656(T)与 Yaniella 属的成员聚在一起。该生物体的细胞壁粘肽基于 L-赖氨酸(变体 A4α,类型 L-Lys-Gly-L-Glu),MK-10 作为主要的menaquinone,以及直链和支链饱和类型的长链细胞脂肪酸(以 iso-C(15:0) 和 anteiso-C(17:0)为主)。极性脂包括二磷脂酰甘油、磷脂酰甘油和磷脂酰肌醇,此外还有未知的糖脂。DNA G+C 含量为 59.7 mol%。基于其独特的基因型和表型特征,菌株 IMMIB L-1656(T)代表了一个新属的新种,因此提议使用 Auritidibacter ignavus 属名。我们还建议将 Yaniellaceae 科的成员转移到微球菌科,并对微球菌亚目进行修订。Auritidibacter ignavus 的模式菌株是 IMMIB L-1656(T)=DSM 45359(T)=CCUG 57943(T)。

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