• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于基因组的间质性膀胱炎汉纳氏溃疡型表达谱研究:一个40基因模型阵列

Genome-based expression profiling study of Hunner's ulcer type interstitial cystitis: an array of 40-gene model.

作者信息

Tseng Ling-Hong, Chen Ilene, Wang Chao-Nin, Lin Yi-Hao, Lloyd L Keith, Lee Chyi-Long

机构信息

Department of Obstetrics and Gynecology, Chang Gung Memorial Hospital and Chang Gung University, School of Medicine, Kwei-Shan, Tao-Yuan, Taiwan.

出版信息

Int Urogynecol J. 2010 Aug;21(8):911-8. doi: 10.1007/s00192-010-1129-x. Epub 2010 Mar 4.

DOI:10.1007/s00192-010-1129-x
PMID:20204322
Abstract

INTRODUCTION AND HYPOTHESIS

The aim of this study was to explore potential molecular mechanisms contributing to the pathogenesis of Hunner's ulcer type interstitial cystitis (IC).

METHODS

Dataset acquisitions from Gene Expression Omnibus under platform accession no GSE 11783. We compared global gene expression profiles in bladder epithelial cells from IC patients with Hunner's ulcer corresponding to normal controls. We re-sampling and exploit the correlation structure presented in the dataset through the transcriptional response. For each patient, two bladder biopsies were studied, one from an ulcer area and one from a non-ulcer area. RNA was extracted, and all labeled samples were hybridized to Human Genome U133 Plus 2.0 Array (Affymetrix, CA, USA).

RESULTS

The Mahalanobis distance in hierarchical cluster analysis revealed a model of 40 genes expression which is increased in IC and ulcerated IC. Our results can be summarized as follows: First, the expressions of major histocompatibility complex (MHC) class IF and II molecules, leukocyte immunoglobulin-like receptors, hepatitis A virus cellular receptor 2, and interleukin 32 were increased in bladder epithelial from IC and ulcerative IC area. Next, there is an indication of antigen-mediated aggregation of the high-affinity Fc epsilon and gamma RI leading to allergic inflammation through the disease status. Third, the high-affinity Fc gamma RI subunit facilitated T-cell-mediated immune response through the disease status. Such changes, jointly termed "bladder remodeling," can constitute an important long-term consequence of Hunner's ulcer type IC.

CONCLUSIONS

Our results indicate that genome-based expression profiling can be used for the diagnostic tests of Hunner's ulcer type IC in clinical practice.

摘要

引言与假设

本研究旨在探索与间质性膀胱炎(IC)中Hunner溃疡发病机制相关的潜在分子机制。

方法

从基因表达综合数据库(Gene Expression Omnibus)获取平台登录号为GSE 11783的数据集。我们比较了患有Hunner溃疡的IC患者膀胱上皮细胞与正常对照的整体基因表达谱。我们通过转录反应对数据集进行重采样并利用其中呈现的相关结构。对于每位患者,研究了两块膀胱活检组织,一块来自溃疡区域,一块来自非溃疡区域。提取RNA,所有标记样本与人类基因组U133 Plus 2.0芯片(美国加利福尼亚州Affymetrix公司)进行杂交。

结果

层次聚类分析中的马氏距离揭示了一个40个基因表达的模型,该模型在IC和溃疡性IC中表达增加。我们的结果可总结如下:首先,主要组织相容性复合体(MHC)I类和II类分子、白细胞免疫球蛋白样受体、甲型肝炎病毒细胞受体2和白细胞介素32在IC和溃疡性IC区域的膀胱上皮中的表达增加。其次,有迹象表明高亲和力Fcε和γRI的抗原介导聚集通过疾病状态导致过敏性炎症。第三,高亲和力FcγRI亚基通过疾病状态促进T细胞介导的免疫反应。这些变化统称为“膀胱重塑”,可能构成Hunner溃疡型IC的重要长期后果。

结论

我们的结果表明,基于基因组的表达谱分析可用于临床实践中Hunner溃疡型IC的诊断测试。

相似文献

1
Genome-based expression profiling study of Hunner's ulcer type interstitial cystitis: an array of 40-gene model.基于基因组的间质性膀胱炎汉纳氏溃疡型表达谱研究:一个40基因模型阵列
Int Urogynecol J. 2010 Aug;21(8):911-8. doi: 10.1007/s00192-010-1129-x. Epub 2010 Mar 4.
2
The role of cystoscopy in the diagnosis of Hunner's ulcer disease.膀胱镜检查在间质性膀胱炎溃疡型疾病诊断中的作用。
J Urol. 2008 Oct;180(4):1383-6. doi: 10.1016/j.juro.2008.06.035. Epub 2008 Aug 15.
3
Genome-based expression profiles as a single standardized microarray platform for the diagnosis of bladder pain syndrome/interstitial cystitis: an array of 139 genes model.基于基因组的表达谱作为诊断膀胱疼痛综合征/间质性膀胱炎的单一标准化微阵列平台:139个基因模型阵列
Int Urogynecol J Pelvic Floor Dysfunct. 2009 May;20(5):515-22. doi: 10.1007/s00192-009-0822-0. Epub 2009 Feb 13.
4
Urothelial Functional Protein and Sensory Receptors in Patients With Interstitial Cystitis/Bladder Pain Syndrome With and Without Hunner's Lesion.伴有和不伴有Hunner病变的间质性膀胱炎/膀胱疼痛综合征患者的尿路上皮功能蛋白和感觉受体
Urology. 2016 Dec;98:44-49. doi: 10.1016/j.urology.2016.08.029. Epub 2016 Aug 26.
5
Assessment of patient outcomes following submucosal injection of triamcinolone for treatment of Hunner's ulcer subtype interstitial cystitis.曲安奈德黏膜下注射治疗Hunner溃疡型间质性膀胱炎的患者预后评估
Can J Urol. 2009 Apr;16(2):4536-40.
6
Analysis of key genes and micro-RNA-mRNA regulatory networks in women with ulcerative interstitial cystitis/pain bladder syndrome.溃疡性间质性膀胱炎/疼痛性膀胱综合征女性患者关键基因及微小RNA-信使核糖核酸调控网络分析
Int Urogynecol J. 2019 Sep;30(9):1487-1495. doi: 10.1007/s00192-018-3817-x. Epub 2018 Nov 19.
7
Bioinformatics analysis of the Hub genes and key pathways of interstitial cystitis pathogenesis.生物信息学分析间质性膀胱炎发病机制的枢纽基因和关键途径。
Neurourol Urodyn. 2020 Jan;39(1):133-143. doi: 10.1002/nau.24196. Epub 2019 Oct 29.
8
Integrated mRNA-miRNA transcriptome analysis of bladder biopsies from patients with bladder pain syndrome identifies signaling alterations contributing to the disease pathogenesis.对膀胱疼痛综合征患者膀胱活检的 mRNA-miRNA 转录组进行综合分析,确定了导致疾病发病机制的信号改变。
BMC Urol. 2021 Dec 7;21(1):172. doi: 10.1186/s12894-021-00934-0.
9
Proteomic analysis of bladder biopsies from interstitial cystitis/bladder pain syndrome patients with and without Hunner's lesions reveals differences in expression of inflammatory and structural proteins.对伴有和不伴有 Hunner 病变的间质性膀胱炎/膀胱疼痛综合征患者的膀胱活检进行蛋白质组学分析,揭示了炎症和结构蛋白表达的差异。
BMC Urol. 2020 Nov 7;20(1):180. doi: 10.1186/s12894-020-00751-x.
10
Cure of Interstitial Cystitis and Non-Ulcerating Hunner's Ulcer by Cardinal/Uterosacral Ligament Repair.经 Cardinal/子宫骶韧带修复治愈间质性膀胱炎和非溃疡性 Hunner 溃疡。
Urol Int. 2021;105(9-10):920-923. doi: 10.1159/000515647. Epub 2021 May 21.

引用本文的文献

1
Identification of novel biomarkers in Hunner's interstitial cystitis using the CIBERSORT, an algorithm based on machine learning.使用基于机器学习的算法CIBERSORT鉴定间质性膀胱炎中的新型生物标志物。
BMC Urol. 2021 Aug 16;21(1):109. doi: 10.1186/s12894-021-00875-8.
2
Purinergic P2X7 receptors as therapeutic targets in interstitial cystitis/bladder pain syndrome; key role of ATP signaling in inflammation.嘌呤能P2X7受体作为间质性膀胱炎/膀胱疼痛综合征的治疗靶点;ATP信号在炎症中的关键作用。
Bladder (San Franc). 2019 Apr 8;6(1):e38. doi: 10.14440/bladder.2019.789. eCollection 2019.
3
Prevention of anti-microbial peptide LL-37-induced apoptosis and ATP release in the urinary bladder by a modified glycosaminoglycan.

本文引用的文献

1
Re: Genome-based expression profiling study following spinal cord injury in the rat: An array of 48-gene model.回复:大鼠脊髓损伤后基于基因组的表达谱研究:一个48基因模型阵列
Neurourol Urodyn. 2010 Nov;29(8):1444. doi: 10.1002/nau.20919.
2
Genevestigator v3: a reference expression database for the meta-analysis of transcriptomes.Genevestigator v3:一个用于转录组元分析的参考表达数据库。
Adv Bioinformatics. 2008;2008:420747. doi: 10.1155/2008/420747. Epub 2008 Jul 8.
3
Gene expression profile of bladder tissue of patients with ulcerative interstitial cystitis.
一种改良的糖胺聚糖可预防抗菌肽 LL-37 诱导的膀胱细胞凋亡和 ATP 释放。
PLoS One. 2013 Oct 30;8(10):e77854. doi: 10.1371/journal.pone.0077854. eCollection 2013.
溃疡性间质性膀胱炎患者膀胱组织的基因表达谱
BMC Genomics. 2009 Apr 28;10:199. doi: 10.1186/1471-2164-10-199.
4
Genome-based expression profiling as a single standardized microarray platform for the diagnosis of endometrial disorder: an array of 126-gene model.基于基因组的表达谱分析作为一种单一的标准化微阵列平台用于子宫内膜疾病的诊断:一个包含 126 个基因模型的阵列。
Fertil Steril. 2010 Jun;94(1):114-9. doi: 10.1016/j.fertnstert.2009.01.130. Epub 2009 Mar 27.
5
Genome-based expression profiles as a single standardized microarray platform for the diagnosis of bladder pain syndrome/interstitial cystitis: an array of 139 genes model.基于基因组的表达谱作为诊断膀胱疼痛综合征/间质性膀胱炎的单一标准化微阵列平台:139个基因模型阵列
Int Urogynecol J Pelvic Floor Dysfunct. 2009 May;20(5):515-22. doi: 10.1007/s00192-009-0822-0. Epub 2009 Feb 13.
6
Genome-based expression profiles as a single standardized microarray platform for the diagnosis of experimental interstitial cystitis: an array of 75 genes model.基于基因组的表达谱作为用于诊断实验性间质性膀胱炎的单一标准化微阵列平台:一个75基因模型阵列
Int Urogynecol J Pelvic Floor Dysfunct. 2009 May;20(5):509-13. doi: 10.1007/s00192-008-0801-x. Epub 2009 Jan 20.
7
AmiGO: online access to ontology and annotation data.AmiGO:在线访问本体和注释数据。
Bioinformatics. 2009 Jan 15;25(2):288-9. doi: 10.1093/bioinformatics/btn615. Epub 2008 Nov 25.
8
The master switch: the role of mast cells in autoimmunity and tolerance.主控开关:肥大细胞在自身免疫和免疫耐受中的作用
Annu Rev Immunol. 2008;26:705-39. doi: 10.1146/annurev.immunol.26.021607.090320.
9
The Gene Ontology project in 2008.2008年的基因本体论项目。
Nucleic Acids Res. 2008 Jan;36(Database issue):D440-4. doi: 10.1093/nar/gkm883. Epub 2007 Nov 4.
10
Serglycin and secretion in human monocytes.丝甘蛋白聚糖与人类单核细胞的分泌
Glycoconj J. 2008 May;25(4):305-11. doi: 10.1007/s10719-007-9073-9. Epub 2007 Oct 2.