• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

2008年的基因本体论项目。

The Gene Ontology project in 2008.

出版信息

Nucleic Acids Res. 2008 Jan;36(Database issue):D440-4. doi: 10.1093/nar/gkm883. Epub 2007 Nov 4.

DOI:10.1093/nar/gkm883
PMID:17984083
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2238979/
Abstract

The Gene Ontology (GO) project (http://www.geneontology.org/) provides a set of structured, controlled vocabularies for community use in annotating genes, gene products and sequences (also see http://www.sequenceontology.org/). The ontologies have been extended and refined for several biological areas, and improvements to the structure of the ontologies have been implemented. To improve the quantity and quality of gene product annotations available from its public repository, the GO Consortium has launched a focused effort to provide comprehensive and detailed annotation of orthologous genes across a number of 'reference' genomes, including human and several key model organisms. Software developments include two releases of the ontology-editing tool OBO-Edit, and improvements to the AmiGO browser interface.

摘要

基因本体论(GO)项目(http://www.geneontology.org/)提供了一组结构化的、受控的词汇表,供社区用于注释基因、基因产物和序列(另见http://www.sequenceontology.org/)。这些本体论已针对多个生物学领域进行了扩展和完善,并且对本体论的结构进行了改进。为了提高其公共知识库中可用的基因产物注释的数量和质量,GO联盟已开展重点工作,以对包括人类和几种关键模式生物在内的多个“参考”基因组中的直系同源基因进行全面而详细的注释。软件开发包括本体编辑工具OBO-Edit的两个版本发布,以及对AmiGO浏览器界面的改进。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a044/2238979/5e4ae8234d72/gkm883f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a044/2238979/5e4ae8234d72/gkm883f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a044/2238979/5e4ae8234d72/gkm883f1.jpg

相似文献

1
The Gene Ontology project in 2008.2008年的基因本体论项目。
Nucleic Acids Res. 2008 Jan;36(Database issue):D440-4. doi: 10.1093/nar/gkm883. Epub 2007 Nov 4.
2
The Gene Ontology (GO) project in 2006.2006年的基因本体论(GO)项目。
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D322-6. doi: 10.1093/nar/gkj021.
3
The Gene Ontology in 2010: extensions and refinements.2010 年的基因本体论:扩展和改进。
Nucleic Acids Res. 2010 Jan;38(Database issue):D331-5. doi: 10.1093/nar/gkp1018. Epub 2009 Nov 17.
4
WEGO: a web tool for plotting GO annotations.WEGO:一个用于绘制基因本体(GO)注释的网络工具。
Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W293-7. doi: 10.1093/nar/gkl031.
5
The Gene Ontology: enhancements for 2011.基因本体论:2011 年的增强。
Nucleic Acids Res. 2012 Jan;40(Database issue):D559-64. doi: 10.1093/nar/gkr1028. Epub 2011 Nov 18.
6
Gene Ontology annotations and resources.基因本体论注释和资源。
Nucleic Acids Res. 2013 Jan;41(Database issue):D530-5. doi: 10.1093/nar/gks1050. Epub 2012 Nov 17.
7
Gene Ontology Consortium: going forward.基因本体论联盟:展望未来。
Nucleic Acids Res. 2015 Jan;43(Database issue):D1049-56. doi: 10.1093/nar/gku1179. Epub 2014 Nov 26.
8
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.Planteome 数据库:参考本体、植物基因组学和表型组学的综合资源。
Nucleic Acids Res. 2018 Jan 4;46(D1):D1168-D1180. doi: 10.1093/nar/gkx1152.
9
The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations.植物本体数据库:一个用于植物结构和发育阶段控制词汇及注释的社区资源。
Nucleic Acids Res. 2008 Jan;36(Database issue):D449-54. doi: 10.1093/nar/gkm908.
10
The Gene Ontology (GO) database and informatics resource.基因本体论(GO)数据库及信息资源。
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D258-61. doi: 10.1093/nar/gkh036.

引用本文的文献

1
Identification and analysis of cuproptosis associated molecular clusters and immunological profiles in atopic dermatitis.特应性皮炎中铜死亡相关分子簇及免疫特征的鉴定与分析
Front Immunol. 2025 Jun 27;16:1545457. doi: 10.3389/fimmu.2025.1545457. eCollection 2025.
2
Emulsion adjuvant-induced uric acid release modulates optimal immunogenicity by targeting dendritic cells and B cells.乳剂佐剂诱导的尿酸释放通过靶向树突状细胞和B细胞来调节最佳免疫原性。
NPJ Vaccines. 2025 Apr 16;10(1):72. doi: 10.1038/s41541-025-01130-z.
3
A teaching proposal for a short course on biomedical data science.

本文引用的文献

1
Sequence ontology annotation guide.序列本体注释指南。
Comp Funct Genomics. 2004;5(8):642-7. doi: 10.1002/cfg.446.
2
A Chado case study: an ontology-based modular schema for representing genome-associated biological information.一个Chado案例研究:用于表示基因组相关生物信息的基于本体的模块化模式。
Bioinformatics. 2007 Jul 1;23(13):i337-46. doi: 10.1093/bioinformatics/btm189.
3
OBO-Edit--an ontology editor for biologists.OBO-Edit——一款面向生物学家的本体编辑器。
一份关于生物医学数据科学短期课程的教学提案。
PLoS Comput Biol. 2025 Apr 14;21(4):e1012946. doi: 10.1371/journal.pcbi.1012946. eCollection 2025 Apr.
4
Transcriptomic and enzymatic analysis of peroxidase families at the early growth stage of halophyte ice plant (Mesembryanthemum crystallinum L.) under salt stress.盐胁迫下盐生植物冰叶日中花(Mesembryanthemum crystallinum L.)生长早期过氧化物酶家族的转录组学和酶学分析
Bot Stud. 2025 Jan 21;66(1):5. doi: 10.1186/s40529-024-00450-y.
5
scGO: interpretable deep neural network for cell status annotation and disease diagnosis.scGO:用于细胞状态注释和疾病诊断的可解释深度神经网络。
Brief Bioinform. 2024 Nov 22;26(1). doi: 10.1093/bib/bbaf018.
6
Transcriptomic clustering of chronic lymphocytic leukemia: molecular subtypes based on Bruton's tyrosine kinase expression levels.慢性淋巴细胞白血病的转录组聚类:基于布鲁顿酪氨酸激酶表达水平的分子亚型
Blood Cancer J. 2024 Dec 18;14(1):220. doi: 10.1038/s41408-024-01196-3.
7
S-PLM: Structure-Aware Protein Language Model via Contrastive Learning Between Sequence and Structure.S-PLM:通过序列与结构之间的对比学习实现的结构感知蛋白质语言模型
Adv Sci (Weinh). 2025 Feb;12(5):e2404212. doi: 10.1002/advs.202404212. Epub 2024 Dec 12.
8
Baicalin Ameliorates Depression-like Behaviors via Inhibiting Neuroinflammation and Apoptosis in Mice.黄芩苷通过抑制小鼠神经炎症和细胞凋亡改善抑郁样行为。
Int J Mol Sci. 2024 Sep 24;25(19):10259. doi: 10.3390/ijms251910259.
9
Comprehensive Proteomic Profiling of Converted Adipocyte-like Cells from Normal Human Dermal Fibroblasts Using Data-Independent Acquisition Mass Spectrometry.使用数据非依赖采集质谱法对正常人皮肤成纤维细胞转化而来的脂肪细胞样细胞进行全面蛋白质组分析。
ACS Omega. 2024 Sep 9;9(38):40034-40050. doi: 10.1021/acsomega.4c05852. eCollection 2024 Sep 24.
10
Identification of key genes and pathways involved in T-DM1-resistance in OE-19 esophageal cancer cells through bioinformatics analysis.通过生物信息学分析鉴定OE-19食管癌细胞中与T-DM1耐药相关的关键基因和通路。
Heliyon. 2024 Sep 6;10(18):e37451. doi: 10.1016/j.heliyon.2024.e37451. eCollection 2024 Sep 30.
Bioinformatics. 2007 Aug 15;23(16):2198-200. doi: 10.1093/bioinformatics/btm112. Epub 2007 Jun 1.
4
Ontology development for biological systems: immunology.生物系统的本体开发:免疫学
Bioinformatics. 2007 Apr 1;23(7):913-5. doi: 10.1093/bioinformatics/btm029. Epub 2007 Jan 31.
5
AgBase: a unified resource for functional analysis in agriculture.AgBase:农业功能分析的统一资源。
Nucleic Acids Res. 2007 Jan;35(Database issue):D599-603. doi: 10.1093/nar/gkl936. Epub 2006 Nov 29.
6
Integrating biological data through the genome.通过基因组整合生物数据。
Hum Mol Genet. 2006 Apr 15;15 Spec No 1:R81-7. doi: 10.1093/hmg/ddl086.
7
The Gene Ontology (GO) project in 2006.2006年的基因本体论(GO)项目。
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D322-6. doi: 10.1093/nar/gkj021.
8
The Sequence Ontology: a tool for the unification of genome annotations.序列本体论:一种统一基因组注释的工具。
Genome Biol. 2005;6(5):R44. doi: 10.1186/gb-2005-6-5-r44. Epub 2005 Apr 29.
9
Gene Ontology: looking backwards and forwards.基因本体论:回顾与展望。
Genome Biol. 2005;6(1):103. doi: 10.1186/gb-2004-6-1-103. Epub 2004 Dec 15.
10
The Gene Ontology (GO) database and informatics resource.基因本体论(GO)数据库及信息资源。
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D258-61. doi: 10.1093/nar/gkh036.