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在肺炎球菌疫苗接种中运用逆问题方法结合监测数据

Using Inverse Problem Methods with Surveillance Data in Pneumococcal Vaccination.

作者信息

Sutton Karyn L, Banks H T, Castillo-Chavez Carlos

机构信息

Center for Research in Scientific Computation, & Center for Quantitative Studies in Biomedicine North Carolina State University, Raleigh, NC 27695-8212.

出版信息

Math Comput Model. 2010 Mar 1;51(5-6):369-388. doi: 10.1016/j.mcm.2009.12.014.

DOI:10.1016/j.mcm.2009.12.014
PMID:20209093
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2831665/
Abstract

The design and evaluation of epidemiological control strategies is central to public health policy. While inverse problem methods are routinely used in many applications, this remains an area in which their use is relatively rare, although their potential impact is great. We describe methods particularly relevant to epidemiological modeling at the population level. These methods are then applied to the study of pneumococcal vaccination strategies as a relevant example which poses many challenges common to other infectious diseases. We demonstrate that relevant yet typically unknown parameters may be estimated, and show that a calibrated model may used to assess implemented vaccine policies through the estimation of parameters if vaccine history is recorded along with infection and colonization information. Finally, we show how one might determine an appropriate level of refinement or aggregation in the age-structured model given age-stratified observations. These results illustrate ways in which the collection and analysis of surveillance data can be improved using inverse problem methods.

摘要

流行病学控制策略的设计与评估是公共卫生政策的核心。虽然反问题方法在许多应用中经常使用,但在这一领域其应用相对较少,尽管其潜在影响很大。我们描述了与人群层面的流行病学建模特别相关的方法。然后将这些方法应用于肺炎球菌疫苗接种策略的研究,作为一个相关实例,该实例提出了许多其他传染病常见的挑战。我们证明可以估计相关但通常未知的参数,并表明如果记录了疫苗接种史以及感染和定植信息,校准后的模型可用于通过参数估计来评估已实施的疫苗政策。最后,我们展示了在给定年龄分层观测数据的情况下,如何在年龄结构模型中确定适当的细化或汇总水平。这些结果说明了使用反问题方法改进监测数据收集和分析的方式。

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本文引用的文献

1
Public vaccination policy using an age-structured model of pneumococcal infection dynamics.基于肺炎球菌感染动力学的年龄结构模型的公共疫苗接种政策。
J Biol Dyn. 2010 Mar;4(2):176-95. doi: 10.1080/17513750903023715.
2
Estimation of invasive pneumococcal disease dynamics parameters and the impact of conjugate vaccination in Australia.澳大利亚侵袭性肺炎球菌疾病动态参数的估计及结合疫苗接种的影响。
Math Biosci Eng. 2008 Jan;5(1):175-204. doi: 10.3934/mbe.2008.5.175.
3
Estimation of dynamic rate parameters in insect populations undergoing sublethal exposure to pesticides.处于农药亚致死暴露状态下昆虫种群动态速率参数的估计
Bull Math Biol. 2007 Oct;69(7):2139-80. doi: 10.1007/s11538-007-9207-z. Epub 2007 Apr 24.
4
[Nasal carriage of Streptococcus pneumoniae in elderly subjects according to vaccination status].[根据疫苗接种状况分析老年受试者肺炎链球菌的鼻腔携带情况]
Rev Med Chil. 2007 Feb;135(2):160-6. doi: 10.4067/s0034-98872007000200003. Epub 2007 Mar 28.
5
Streptococcus pneumoniae: description of the pathogen, disease epidemiology, treatment, and prevention.肺炎链球菌:病原体描述、疾病流行病学、治疗与预防
Pharmacotherapy. 2005 Sep;25(9):1193-212. doi: 10.1592/phco.2005.25.9.1193.
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Invasive pneumococcal disease in Australia, 2003.2003年澳大利亚侵袭性肺炎球菌疾病
Commun Dis Intell Q Rep. 2004;28(4):441-54. doi: 10.33321/cdi.2004.28.48.
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Invasive pneumococcal disease in Australia, 2002.2002年澳大利亚的侵袭性肺炎球菌疾病
Commun Dis Intell Q Rep. 2003;27(4):466-77. doi: 10.33321/cdi.2003.27.75.
8
Using computer simulations to compare pertussis vaccination strategies in Australia.利用计算机模拟比较澳大利亚的百日咳疫苗接种策略。
Vaccine. 2004 Jun 2;22(17-18):2181-91. doi: 10.1016/j.vaccine.2003.11.053.
9
Invasive pneumococcal disease in Australia, 2001.2001年澳大利亚的侵袭性肺炎球菌疾病
Commun Dis Intell Q Rep. 2002;26(4):505-19. doi: 10.33321/cdi.2002.26.48.
10
Nasopharyngeal carriage of Streptococcus pneumoniae in Finnish children younger than 2 years old.2岁以下芬兰儿童肺炎链球菌的鼻咽部携带情况
J Infect Dis. 2001 Aug 15;184(4):451-9. doi: 10.1086/322048. Epub 2001 Jul 6.