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金鼹(Mammalia, Afrotheria, Chrysochloridae)的系统发育估计。

A phylogenetic estimate for golden moles (Mammalia, Afrotheria, Chrysochloridae).

机构信息

Department of Zoology, University of Cambridge, Cambridge, UK.

出版信息

BMC Evol Biol. 2010 Mar 9;10:69. doi: 10.1186/1471-2148-10-69.

Abstract

BACKGROUND

Golden moles (Chrysochloridae) are small, subterranean, afrotherian mammals from South Africa and neighboring regions. Of the 21 species now recognized, some (e.g., Chrysochloris asiatica, Amblysomus hottentotus) are relatively common, whereas others (e.g., species of Chrysospalax, Cryptochloris, Neamblysomus) are rare and endangered. Here, we use a combined analysis of partial sequences of the nuclear GHR gene and morphological characters to derive a phylogeny of species in the family Chrysochloridae.

RESULTS

Although not all nodes of the combined analysis have high support values, the overall pattern of relationships obtained from different methods of phylogeny reconstruction allow us to make several recommendations regarding the current taxonomy of golden moles. We elevate Huetia to generic status to include the species leucorhinus and confirm the use of the Linnean binomial Carpitalpa arendsi, which belongs within Amblysominae along with Amblysomus and Neamblysomus. A second group, Chrysochlorinae, includes Chrysochloris, Cryptochloris, Huetia, Eremitalpa, Chrysospalax, and Calcochloris. Bayesian methods make chrysochlorines paraphyletic by placing the root within them, coinciding with root positions favored by a majority of randomly-generated outgroup taxa. Maximum Parsimony (MP) places the root either between chrysochlorines and amblysomines (with Chlorotalpa as sister taxon to amblysomines), or at Chlorotalpa, with the former two groups reconstructed as monophyletic in all optimal MP trees.

CONCLUSIONS

The inclusion of additional genetic loci for this clade is important to confirm our taxonomic results and resolve the chrysochlorid root. Nevertheless, our optimal topologies support a division of chrysochlorids into amblysomines and chrysochlorines, with Chlorotalpa intermediate between the two. Furthermore, evolution of the chrysochlorid malleus exhibits homoplasy. The elongate malleus has evolved just once in the Cryptochloris-Chrysochloris group; other changes in shape have occurred at multiple nodes, regardless of how the root is resolved.

摘要

背景

金鼹科(Chrysochloridae)是来自南非和邻近地区的小型地下非洲有蹄类哺乳动物。在现在确认的 21 个物种中,一些(如 Chrysochloris asiatica、Amblysomus hottentotus)相对常见,而另一些(如 Chrysospalax、Cryptochloris、Neamblysomus 物种)则罕见且濒危。在这里,我们使用核 GHR 基因的部分序列和形态特征的组合分析来推导出金鼹科物种的系统发育。

结果

尽管组合分析的所有节点都没有很高的支持值,但不同系统发育重建方法得出的关系总体模式使我们能够对金鼹科的当前分类提出一些建议。我们将 Huetia 提升为属级地位,包括 leucorhinus 种,并确认使用 Linnean 二名法 Carpitalpa arendsi,它与 Amblysomus 和 Neamblysomus 一起属于 Amblysominae。第二个组,Chrysochlorinae,包括 Chrysochloris、Cryptochloris、Huetia、Eremitalpa、Chrysospalax 和 Calcochloris。贝叶斯方法通过将根放在其中使金鼹科成为并系群,这与大多数随机生成的外群分类群所支持的根位置一致。最大简约法(MP)将根置于金鼹科和 Amblysominae 之间(Chlorotalpa 是 Amblysominae 的姊妹分类群),或者将根置于 Chlorotalpa,在所有最优 MP 树中,前两个组被重建为单系群。

结论

为这个分支包含更多的遗传基因座对于确认我们的分类结果和解决金鼹科的根非常重要。尽管如此,我们的最优拓扑结构支持将金鼹科分为 Amblysominae 和 Chrysochlorinae,Chlorotalpa 介于两者之间。此外,金鼹科锤骨的进化表现出同形性。在 Cryptochloris-Chrysochloris 组中,细长的锤骨仅进化了一次;其他形状的变化发生在多个节点,无论根如何解决。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/907c/2850353/826088881a25/1471-2148-10-69-1.jpg

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