Department of Genetics, Institute of Ophthalmology, London, UK.
Invest Ophthalmol Vis Sci. 2010 Aug;51(8):4266-72. doi: 10.1167/iovs.09-5109. Epub 2010 Mar 17.
Recently, a novel gene was cloned for autosomal recessive retinitis pigmentosa (arRP), EYS, on 6q12. This study was conducted to determine the spectrum and frequency of EYS mutations in 195 unrelated patients with autosomal recessive and autosomal dominant RP (adRP).
All cases had a complete ophthalmic examination, and the clinical diagnosis of RP was based on visual acuity, fundus photography, and electroretinography findings. The DNA extracted from all participants was subjected to molecular genetic analysis entailing amplification of the coding regions and exon-intron boundaries of EYS by polymerase chain reaction, followed by direct sequencing. Bioinformatics analysis was undertaken to study the effect of the identified mutations on protein structure and function.
Eleven novel missense, nonsense, and splice site mutations were identified within EYS in 10 unrelated arRP patients, with probable allele frequency of 11%. However, no mutations were observed in the adRP panel. In addition, 53 single-nucleotide polymorphisms (SNPs) were found, of which 12 were previously unreported. Bioinformatics analyses revealed that all mutations were highly conserved across other species and/or involved important domains on protein structure. Intrafamilial phenotypic variability was also observed in a family with double heterozygous mutations.
This is the first report of molecular genetic analysis of EYS in a cohort of unrelated British and Chinese patients with RP. The results further the initial hypothesis that EYS is a major causative gene for recessive RP and emphasize the role of different types of mutations in disrupting the function of EYS.
最近,一种新的基因在 6q12 上被克隆出来,用于常染色体隐性视网膜色素变性(arRP),EYS。本研究旨在确定 195 例常染色体隐性和常染色体显性 RP(adRP)患者 EYS 突变的谱和频率。
所有病例均进行了全面的眼科检查,根据视力、眼底照相和视网膜电图结果,临床诊断为 RP。从所有参与者中提取的 DNA 进行分子遗传学分析,包括聚合酶链反应扩增 EYS 的编码区和外显子-内含子边界,然后直接测序。进行生物信息学分析,以研究所鉴定的突变对蛋白质结构和功能的影响。
在 10 名无亲缘关系的 arRP 患者的 EYS 中发现了 11 种新的错义、无义和剪接位点突变,可能的等位基因频率为 11%。然而,在 adRP 组中没有发现突变。此外,还发现了 53 个单核苷酸多态性(SNP),其中 12 个是以前未报道过的。生物信息学分析表明,所有突变在其他物种中高度保守,或涉及蛋白质结构的重要结构域。在一个具有双杂合突变的家族中也观察到了家族内表型的可变性。
这是首次对英国和中国 RP 患者的 EYS 进行分子遗传学分析的报告。结果进一步证实了 EYS 是隐性 RP 的主要致病基因的初始假设,并强调了不同类型的突变在破坏 EYS 功能方面的作用。