Suppr超能文献

在 TiO2(110)表面上脯氨酸和甘氨酸的吸附:密度泛函理论研究。

Adsorption of proline and glycine on the TiO2(110) surface: a density functional theory study.

机构信息

Centre for Theoretical Chemistry and Physics, New Zealand Institute for Advanced Study, Massey University Albany, Private Bag 102904, North Shore City, 0745 Auckland, New Zealand.

出版信息

Chemphyschem. 2010 Apr 6;11(5):1053-61. doi: 10.1002/cphc.200900902.

Abstract

The optimal adsorption modes for the amino acids glycine and proline on the ideal TiO(2)(110) surface are investigated by using density functional theory (PBE) applying periodic boundary conditions. Binding modes with anionic acid moieties bridging two titanium atoms after transferring a proton to the surface are the most stable configurations for both molecules investigated-similar to previous results for carboxylic acids. In contrast to the latter compounds, amino acids can form hydrogen bonds via the amino group towards the surface-bound proton; this provides an additional stabilisation of 15-20 kJ mol(-1). Zwitterionic binding modes are less stable (by 10-20 kJ mol(-1)) and are less important for proline. Neutral modes are energetically even less favourable. Calculations of vibrational frequencies and core-level shifts complement the adsorption study and provide guidance for future experimental investigations. Control of the computational parameters is crucial for the derivation of accurate results. The layout and thickness of the slab model used are also shown to be decisive factors. Calculations with a different GGA-functional (PW91) provide very similar relative energies, although the absolute energies change by about 20 kJ mol(-1). Results derived with the hybrid functional PBE0 show an even greater stabilisation of the anionic binding modes with respect to the zwitterionic modes. A previously observed discrepancy between experimental and theoretical results for glycine could be solved, although the experimentally proposed free rotation of the C-C bond could not be reproduced.

摘要

采用基于密度泛函理论(PBE)的周期性边界条件,研究了氨基酸甘氨酸和脯氨酸在理想 TiO(2)(110)表面的最佳吸附模式。对于这两种分子,最稳定的构型是质子转移到表面后,带负电荷的酸部分桥接两个钛原子的吸附模式-与之前羧酸的结果相似。与后者不同的是,氨基酸可以通过氨基与表面结合的质子形成氢键;这提供了 15-20 kJ mol(-1)的额外稳定性。两性离子结合模式的稳定性较低(低 10-20 kJ mol(-1)),对于脯氨酸的重要性较低。中性模式在能量上甚至更不利。振动频率和核心能级位移的计算补充了吸附研究,并为未来的实验研究提供了指导。控制计算参数对于得出准确的结果至关重要。所使用的薄片模型的布局和厚度也是决定性因素。使用不同的 GGA 函数(PW91)进行的计算提供了非常相似的相对能量,尽管绝对能量变化约为 20 kJ mol(-1)。与杂化泛函 PBE0 得出的结果相比,阴离子结合模式相对于两性离子模式具有更大的稳定性。虽然无法重现实验中提出的 C-C 键自由旋转,但可以解决之前观察到的甘氨酸实验和理论结果之间的差异。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验