Chemical and Physical Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, 28040 Madrid, Spain.
Carbohydr Res. 2010 Jul 2;345(10):1461-8. doi: 10.1016/j.carres.2010.02.019. Epub 2010 Feb 25.
The interaction of a synthetically prepared mutant peptide of hevein (a well known chitin-binding lectin) Hev32S19D with chitin oligosaccharides (and chitosan analogues) has allowed us to estimate their affinity constants and associated thermodynamic data. The mutant peptide is able to bind chitin oligomers, but with significant decreases in the association constants with chito-oligosaccharides. The determination of the three-dimensional structure of the peptide mutant, by using NMR, has permitted us to deduce that the topology of the backbone is very similar to that of the parent Hev32 peptide. The same is true regarding the orientations of the key aromatic residues Trp21, Trp23, and Tyr30. The decrease in the association constants can be attributed to the different topological orientation of key side chains and to the importance of protein-sugar intermolecular essential hydrogen bonds and CH-pi stacking interactions. The analysis has permitted us to infer the free energy of binding associated with these interactions as well as to estimate the corresponding binding enthalpy.
我们通过合成制备的海啡肽(一种熟知的几丁质结合凝集素)Hev32S19D 的突变肽与几丁寡糖(和壳聚糖类似物)的相互作用,使我们能够估计它们的亲和常数和相关热力学数据。该突变肽能够结合几丁寡聚物,但与几丁寡糖的结合常数显著降低。通过使用 NMR 确定肽突变体的三维结构,使我们能够推断出其主链的拓扑结构与亲本 Hev32 肽非常相似。关键芳香族残基色氨酸 21、色氨酸 23 和酪氨酸 30 的取向也是如此。结合常数的降低归因于关键侧链的不同拓扑取向,以及蛋白质-糖分子间必需氢键和 CH-π 堆积相互作用的重要性。该分析使我们能够推断出与这些相互作用相关的结合自由能,并估计相应的结合焓。