Department of Epidemiology, Graduate School of Public Health, 130 North Bellefield Avenue, Suite 500, University of Pittsburgh, Pittsburgh, PA 15213, USA.
J Gerontol A Biol Sci Med Sci. 2010 May;65(5):478-87. doi: 10.1093/gerona/glq028. Epub 2010 Mar 18.
Genome-wide association studies (GWAS) may yield insights into longevity.
We performed a meta-analysis of GWAS in Caucasians from four prospective cohort studies: the Age, Gene/Environment Susceptibility-Reykjavik Study, the Cardiovascular Health Study, the Framingham Heart Study, and the Rotterdam Study participating in the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium. Longevity was defined as survival to age 90 years or older (n = 1,836); the comparison group comprised cohort members who died between the ages of 55 and 80 years (n = 1,955). In a second discovery stage, additional genotyping was conducted in the Leiden Longevity Study cohort and the Danish 1905 cohort.
There were 273 single-nucleotide polymorphism (SNP) associations with p < .0001, but none reached the prespecified significance level of 5 x 10(-8). Of the most significant SNPs, 24 were independent signals, and 16 of these SNPs were successfully genotyped in the second discovery stage, with one association for rs9664222, reaching 6.77 x 10(-7) for the combined meta-analysis of CHARGE and the stage 2 cohorts. The SNP lies in a region near MINPP1 (chromosome 10), a well-conserved gene involved in regulation of cellular proliferation. The minor allele was associated with lower odds of survival past age 90 (odds ratio = 0.82). Associations of interest in a homologue of the longevity assurance gene (LASS3) and PAPPA2 were not strengthened in the second stage.
Survival studies of larger size or more extreme or specific phenotypes may support or refine these initial findings.
全基因组关联研究(GWAS)可能会深入了解长寿。
我们对来自四个前瞻性队列研究的高加索人进行了 GWAS 的荟萃分析:年龄、基因/环境易感性-雷克雅未克研究、心血管健康研究、弗雷明汉心脏研究和鹿特丹研究,这些研究都参与了基因组流行病学中心和老龄化研究的队列(CHARGE)联盟。长寿的定义是存活到 90 岁或以上(n = 1836);对照组包括在 55 至 80 岁之间死亡的队列成员(n = 1955)。在第二个发现阶段,在莱顿长寿研究队列和丹麦 1905 队列中进行了额外的基因分型。
有 273 个单核苷酸多态性(SNP)与 p <.0001 相关,但没有一个达到预设的显著性水平 5 x 10(-8)。在最显著的 SNP 中,有 24 个是独立的信号,其中 16 个 SNP 在第二个发现阶段成功进行了基因分型,rs9664222 与 rs9664222 的关联达到了 CHARGE 和阶段 2 队列的联合荟萃分析的 6.77 x 10(-7)。该 SNP 位于 MINPP1(10 号染色体)附近的一个区域,该基因是一个高度保守的基因,参与细胞增殖的调节。次要等位基因与超过 90 岁的存活几率较低相关(比值比=0.82)。在第二阶段,与长寿保证基因(LASS3)和 PAPPA2 同源物相关的感兴趣的关联并没有得到加强。
更大规模或更极端或特定表型的生存研究可能会支持或完善这些初步发现。