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1
Blocking the K-pathway still allows rapid one-electron reduction of the binuclear center during the anaerobic reduction of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides.在对球形红细菌的aa3型细胞色素c氧化酶进行厌氧还原过程中,阻断K途径仍能使双核中心快速发生单电子还原。
Biochim Biophys Acta. 2010 Jun-Jul;1797(6-7):619-24. doi: 10.1016/j.bbabio.2010.03.012. Epub 2010 Mar 20.
2
Effects of mutation of the conserved lysine-362 in cytochrome c oxidase from Rhodobacter sphaeroides.球形红杆菌细胞色素c氧化酶中保守赖氨酸-362突变的影响。
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3
Transmembrane charge separation during the ferryl-oxo -> oxidized transition in a nonpumping mutant of cytochrome c oxidase.细胞色素c氧化酶非泵送突变体中高铁-氧 -> 氧化转变过程中的跨膜电荷分离。
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4
G204D, a mutation that blocks the proton-conducting D-channel of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides.G204D,一种阻止球形红细菌aa3型细胞色素c氧化酶质子传导D通道的突变。
Biochemistry. 2005 Sep 27;44(38):12767-74. doi: 10.1021/bi051141m.
5
Substitutions for glutamate 101 in subunit II of cytochrome c oxidase from Rhodobacter sphaeroides result in blocking the proton-conducting K-channel.球形红杆菌细胞色素c氧化酶亚基II中谷氨酸101的替代导致质子传导K通道受阻。
Biochemistry. 2003 Feb 18;42(6):1711-7. doi: 10.1021/bi026750y.
6
Role of the pathway through K(I-362) in proton transfer in cytochrome c oxidase from R. sphaeroides.球形红细菌细胞色素c氧化酶中通过K(I-362)的途径在质子转移中的作用。
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7
Single electron reduction of cytochrome c oxidase compound F: resolution of partial steps by transient spectroscopy.细胞色素c氧化酶复合物F的单电子还原:通过瞬态光谱解析部分步骤
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8
Identity of the axial ligand of the high-spin heme in cytochrome oxidase: spectroscopic characterization of mutants in the bo-type oxidase of Escherichia coli and the aa3-type oxidase of Rhodobacter sphaeroides.细胞色素氧化酶中高自旋血红素轴向配体的身份:大肠杆菌bo型氧化酶和球形红杆菌aa3型氧化酶突变体的光谱表征
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9
Properties of Arg481 mutants of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides suggest that neither R481 nor the nearby D-propionate of heme a3 is likely to be the proton loading site of the proton pump.来自球形红细菌的aa3型细胞色素c氧化酶的Arg481突变体的特性表明,R481和血红素a3附近的D-丙酸都不太可能是质子泵的质子加载位点。
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10
Mechanism of inhibition of electron transfer by amino acid replacement K362M in a proton channel of Rhodobacter sphaeroides cytochrome c oxidase.球形红杆菌细胞色素c氧化酶质子通道中氨基酸替换K362M对电子传递的抑制机制。
Biochemistry. 1998 Mar 3;37(9):3053-61. doi: 10.1021/bi971876u.

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Protonation-State Dependence of Hydration and Interactions in the Two Proton-Conducting Channels of Cytochrome c Oxidase.质子化状态对细胞色素 c 氧化酶两个质子传导通道中水合和相互作用的影响。
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Biochim Biophys Acta. 2012 Apr;1817(4):545-51. doi: 10.1016/j.bbabio.2011.10.001. Epub 2011 Oct 14.
6
Differential effects of glutamate-286 mutations in the aa(3)-type cytochrome c oxidase from Rhodobacter sphaeroides and the cytochrome bo(3) ubiquinol oxidase from Escherichia coli.来自球形红杆菌的aa(3)型细胞色素c氧化酶和来自大肠杆菌的细胞色素bo(3)泛醇氧化酶中谷氨酸-286突变的差异效应。
Biochim Biophys Acta. 2011 Oct;1807(10):1342-8. doi: 10.1016/j.bbabio.2011.06.001. Epub 2011 Jun 12.

本文引用的文献

1
The cytochrome ba3 oxygen reductase from Thermus thermophilus uses a single input channel for proton delivery to the active site and for proton pumping.嗜热栖热菌的细胞色素ba3氧还原酶利用单一输入通道将质子传递至活性位点并用于质子泵浦。
Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16169-73. doi: 10.1073/pnas.0905264106. Epub 2009 Sep 10.
2
Properties of Arg481 mutants of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides suggest that neither R481 nor the nearby D-propionate of heme a3 is likely to be the proton loading site of the proton pump.来自球形红细菌的aa3型细胞色素c氧化酶的Arg481突变体的特性表明,R481和血红素a3附近的D-丙酸都不太可能是质子泵的质子加载位点。
Biochemistry. 2009 Aug 4;48(30):7123-31. doi: 10.1021/bi901015d.
3
Redox-dependent conformational changes in cytochrome C oxidase suggest a gating mechanism for proton uptake.细胞色素C氧化酶中依赖氧化还原的构象变化表明了质子摄取的门控机制。
Biochemistry. 2009 Jun 16;48(23):5121-30. doi: 10.1021/bi9001387.
4
The protonation state of the cross-linked tyrosine during the catalytic cycle of cytochrome c oxidase.细胞色素c氧化酶催化循环过程中交联酪氨酸的质子化状态。
J Biol Chem. 2008 Dec 12;283(50):34907-12. doi: 10.1074/jbc.M803511200. Epub 2008 Oct 17.
5
A conserved steroid binding site in cytochrome C oxidase.细胞色素C氧化酶中一个保守的类固醇结合位点。
Biochemistry. 2008 Sep 23;47(38):9931-3. doi: 10.1021/bi8013483. Epub 2008 Aug 30.
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The proton donor for O-O bond scission by cytochrome c oxidase.细胞色素c氧化酶催化O-O键断裂的质子供体。
Proc Natl Acad Sci U S A. 2008 Aug 5;105(31):10733-7. doi: 10.1073/pnas.0802512105. Epub 2008 Jul 29.
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Looking for the minimum common denominator in haem-copper oxygen reductases: towards a unified catalytic mechanism.探寻血铜氧化酶的最小公分母:迈向统一的催化机制
Biochim Biophys Acta. 2008 Jul-Aug;1777(7-8):929-34. doi: 10.1016/j.bbabio.2008.05.441. Epub 2008 May 26.
8
Charge transfer in the K proton pathway linked to electron transfer to the catalytic site in cytochrome c oxidase.与细胞色素c氧化酶催化位点的电子转移相关的K质子途径中的电荷转移。
Biochemistry. 2008 Apr 29;47(17):4929-35. doi: 10.1021/bi7024707. Epub 2008 Apr 5.
9
The K-pathway revisited: a computational study on cytochrome c oxidase.重新审视K途径:细胞色素c氧化酶的计算研究
Biochim Biophys Acta. 2006 Sep-Oct;1757(9-10):1117-21. doi: 10.1016/j.bbabio.2006.05.041. Epub 2006 Jun 7.
10
Calculated proton uptake on anaerobic reduction of cytochrome C oxidase: is the reaction electroneutral?细胞色素C氧化酶厌氧还原过程中质子摄取量的计算:该反应是否为电中性?
Biochemistry. 2006 Jul 4;45(26):7959-75. doi: 10.1021/bi052183d.

在对球形红细菌的aa3型细胞色素c氧化酶进行厌氧还原过程中,阻断K途径仍能使双核中心快速发生单电子还原。

Blocking the K-pathway still allows rapid one-electron reduction of the binuclear center during the anaerobic reduction of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides.

作者信息

Ganesan Krithika, Gennis Robert B

机构信息

Biophysics and Computational Biology, Department of Biochemistry, University of Illinois, Urbana, IL 61801, USA.

出版信息

Biochim Biophys Acta. 2010 Jun-Jul;1797(6-7):619-24. doi: 10.1016/j.bbabio.2010.03.012. Epub 2010 Mar 20.

DOI:10.1016/j.bbabio.2010.03.012
PMID:20307488
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2891110/
Abstract

The K-pathway is one of the two proton-input channels required for function of cytochrome c oxidase. In the Rhodobacter sphaeroides cytochrome c oxidase, the K-channel starts at Glu101 in subunit II, which is at the surface of the protein exposed to the cytoplasm, and runs to Tyr288 at the heme a3/CuB active site. Mutations of conserved, polar residues within the K-channel block or inhibit steady state oxidase activity. A large body of research has demonstrated that the K-channel is required to fully reduce the heme/Cu binuclear center, prior to the reaction with O2, presumably by providing protons to stabilize the reduced metals (ferrous heme a3 and cuprous CuB). However, there are conflicting reports which raise questions about whether blocking the K-channel blocks both electrons or only one electron from reaching the heme/Cu center. In the current work, the rate and extent of the anaerobic reduction of the heme/Cu center were monitored by optical and EPR spectroscopies, comparing the wild type and mutants that block the K-channel. The new data show that when the K-channel is blocked, one electron will still readily enter the binuclear center. The one-electron reduction of the resting oxidized ("O") heme/Cu center of the K362M mutant, results in a partially reduced binuclear center in which the electron is distributed about evenly between heme a3 and CuB in the R. sphaeroides oxidase. Complete reduction of the heme/Cu center requires the uptake of two protons which must be delivered through the K-channel.

摘要

K通道是细胞色素c氧化酶发挥功能所需的两个质子输入通道之一。在球形红杆菌细胞色素c氧化酶中,K通道从亚基II中的Glu101开始,该位点位于蛋白质暴露于细胞质的表面,延伸至血红素a3/CuB活性位点处的Tyr288。K通道内保守的极性残基发生突变会阻断或抑制稳态氧化酶活性。大量研究表明,K通道在与O2反应之前是完全还原血红素/Cu双核中心所必需的,大概是通过提供质子来稳定还原态金属(亚铁血红素a3和亚铜CuB)。然而,有相互矛盾的报道,这引发了关于阻断K通道是阻止两个电子还是仅阻止一个电子到达血红素/Cu中心的疑问。在当前的工作中,通过光学和电子顺磁共振光谱监测血红素/Cu中心的厌氧还原速率和程度,比较野生型和阻断K通道的突变体。新数据表明,当K通道被阻断时,一个电子仍能轻易进入双核中心。K362M突变体静止氧化态(“O”)血红素/Cu中心的单电子还原导致部分还原的双核中心,在球形红杆菌氧化酶中,电子在血红素a3和CuB之间大致均匀分布。血红素/Cu中心的完全还原需要摄取两个质子,这两个质子必须通过K通道传递。