Department of Chemistry and Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, USA.
J Biol Chem. 2010 May 28;285(22):16521-9. doi: 10.1074/jbc.M110.119164. Epub 2010 Mar 31.
The bacterial RecN protein is involved in the recombinational repair of DNA double-stranded breaks, and recN mutants are sensitive to DNA-damaging agents. Little is known about the biochemical function of RecN. Protein sequence analysis suggests that RecN is related to the SMC (structural maintenance of chromosomes) family of proteins, predicting globular N- and C-terminal domains connected by an extensive coil-coiled domain. The N- and C-domains contain the nucleotide-binding sequences Walker A and Walker B, respectively. We have purified the RecN protein from Deinococcus radiodurans and characterized its DNA-dependent and DNA-independent ATPase activity. The RecN protein hydrolyzes ATP with a k(cat) of 24 min(-1), and this rate is stimulated 4-fold by duplex DNA but not by single-stranded DNA. This DNA-dependent ATP turnover rate exhibits a dependence on the concentration of RecN protein, suggesting that RecN-RecN interactions are required for efficient ATP hydrolysis, and those interactions are stabilized only by duplex DNA. Finally, we show that RecN stimulates the intermolecular ligation of linear DNA molecules in the presence of DNA ligase. This DNA bridging activity is strikingly similar to that of the cohesin complex, an SMC family member, to which RecN is related.
细菌 RecN 蛋白参与 DNA 双链断裂的重组修复,recN 突变体对 DNA 损伤剂敏感。关于 RecN 的生化功能知之甚少。蛋白质序列分析表明 RecN 与 SMC(染色体结构维持)家族的蛋白质有关,预测球形 N 端和 C 端结构域通过广泛的螺旋-卷曲结构域连接。N 端和 C 端结构域分别包含核苷酸结合序列 Walker A 和 Walker B。我们已经从耐辐射球菌中纯化了 RecN 蛋白,并对其 DNA 依赖性和 DNA 非依赖性 ATP 酶活性进行了表征。RecN 蛋白以 24 min(-1)的速率水解 ATP,该速率被双链 DNA 增强 4 倍,但不被单链 DNA 增强。这种 DNA 依赖性 ATP 周转率依赖于 RecN 蛋白的浓度,表明 RecN-RecN 相互作用对于有效的 ATP 水解是必需的,并且这些相互作用仅被双链 DNA 稳定。最后,我们表明 RecN 在 DNA 连接酶存在下可刺激线性 DNA 分子的分子间连接。这种 DNA 桥接活性与 cohesin 复合物(SMC 家族成员)非常相似,RecN 与 cohesin 复合物有关。