Bioinformatics Research Centre, Aarhus University, DK-8000 Aarhus C, Denmark.
Hum Genomics. 2010 Feb;4(3):207-12. doi: 10.1186/1479-7364-4-3-207.
The CATH database provides hierarchical classification of protein domains based on their folding patterns. Domains are obtained from protein structures deposited in the Protein Data Bank and both domain identification and subsequent classification use manual as well as automated procedures. The accompanying website (www.cathdb.info) provides an easy-to-use entry to the classification, allowing for both browsing and downloading of data. Here, we give a brief review of the database, its corresponding website and some related tools.
CATH 数据库提供基于折叠模式的蛋白质结构域的层次分类。结构域从蛋白质结构数据库(PDB)中获取,结构域的鉴定和分类既采用人工程序,也采用自动化程序。配套网站(www.cathdb.info)提供了一个方便易用的分类入口,允许浏览和下载数据。在此,我们简要介绍一下数据库、配套网站和一些相关工具。