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幼体发育:泛素化蛋白降解的体外特性分析。

Pup grows up: in vitro characterization of the degradation of pupylated proteins.

机构信息

Department of Biochemistry, Molecular Biology and Cell Biology, Northwestern University, Evanston, IL, USA.

出版信息

EMBO J. 2010 Apr 7;29(7):1163-4. doi: 10.1038/emboj.2010.40.

DOI:10.1038/emboj.2010.40
PMID:20372178
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2857470/
Abstract

By reconstituting the recently discovered prokaryotic ubiquitin-like protein (Pup)--proteasome degradation system in vitro, Weber-Ban and colleagues (Striebel et al, 2010) elucidate its mechanism and describe a surprising variation on the established principles of protease targeting. Nevertheless, their findings suggest that the bacterial and eukaryotic systems follow the same overall principles even if the details differ.

摘要

通过在体外重建最近发现的原核泛素样蛋白 (Pup) - 蛋白酶体降解系统,Weber-Ban 和同事(Striebel 等人,2010)阐明了其机制,并描述了在已建立的蛋白酶靶向原则上的一个惊人变化。然而,他们的发现表明,即使细节不同,细菌和真核系统也遵循相同的总体原则。

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1
Pup grows up: in vitro characterization of the degradation of pupylated proteins.幼体发育:泛素化蛋白降解的体外特性分析。
EMBO J. 2010 Apr 7;29(7):1163-4. doi: 10.1038/emboj.2010.40.
2
The mycobacterial Mpa-proteasome unfolds and degrades pupylated substrates by engaging Pup's N-terminus.分枝杆菌 Mpa 蛋白酶体通过与 Pup 的 N 端结合来展开和降解泛素化底物。
EMBO J. 2010 Apr 7;29(7):1262-71. doi: 10.1038/emboj.2010.23. Epub 2010 Mar 4.
3
Ubiquitin-like protein involved in the proteasome pathway of Mycobacterium tuberculosis.参与结核分枝杆菌蛋白酶体途径的类泛素蛋白。
Science. 2008 Nov 14;322(5904):1104-7. doi: 10.1126/science.1163885. Epub 2008 Oct 2.
4
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Pupylated proteins are subject to broad proteasomal degradation specificity and differential depupylation.被泛素化的蛋白质受到广泛的蛋白酶体降解特异性和差异去泛素化的影响。
PLoS One. 2019 Apr 22;14(4):e0215439. doi: 10.1371/journal.pone.0215439. eCollection 2019.
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Structural basis of prokaryotic ubiquitin-like protein engagement and translocation by the mycobacterial Mpa-proteasome complex.细菌泛素样蛋白与分枝杆菌 Mpa-蛋白酶体复合物结合和易位的结构基础。
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Fate of pup inside the Mycobacterium proteasome studied by in-cell NMR.细胞内 NMR 研究 Mycobacterium proteasome 内的幼仔命运。
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The Pup-Proteasome System of Mycobacteria.分枝杆菌的 Pup-蛋白酶体系统。
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Activity of the mycobacterial proteasomal ATPase Mpa is reversibly regulated by pupylation.分枝杆菌蛋白酶体 ATP 酶 Mpa 的活性可被多泛素化作用可逆调节。
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"Depupylation" of prokaryotic ubiquitin-like protein from mycobacterial proteasome substrates.原核泛素样蛋白的去泛素化作用,来自分枝杆菌蛋白酶体底物。
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引用本文的文献

1
Computational Identification of Protein Pupylation Sites by Using Profile-Based Composition of k-Spaced Amino Acid Pairs.基于k间隔氨基酸对的轮廓组成对蛋白质泛素样修饰位点进行计算识别
PLoS One. 2015 Jun 16;10(6):e0129635. doi: 10.1371/journal.pone.0129635. eCollection 2015.

本文引用的文献

1
The mycobacterial Mpa-proteasome unfolds and degrades pupylated substrates by engaging Pup's N-terminus.分枝杆菌 Mpa 蛋白酶体通过与 Pup 的 N 端结合来展开和降解泛素化底物。
EMBO J. 2010 Apr 7;29(7):1262-71. doi: 10.1038/emboj.2010.23. Epub 2010 Mar 4.
2
Targeting proteins for degradation.靶向蛋白质降解。
Nat Chem Biol. 2009 Nov;5(11):815-22. doi: 10.1038/nchembio.250.
3
Structural insights on the Mycobacterium tuberculosis proteasomal ATPase Mpa.结核分枝杆菌蛋白酶体 ATP 酶 Mpa 的结构见解。
Structure. 2009 Oct 14;17(10):1377-85. doi: 10.1016/j.str.2009.08.010.
4
A distinct structural region of the prokaryotic ubiquitin-like protein (Pup) is recognized by the N-terminal domain of the proteasomal ATPase Mpa.原核生物类泛素蛋白(Pup)的一个独特结构区域被蛋白酶体ATP酶Mpa的N端结构域识别。
FEBS Lett. 2009 Oct 6;583(19):3151-7. doi: 10.1016/j.febslet.2009.09.020. Epub 2009 Sep 15.
5
Pup, a prokaryotic ubiquitin-like protein, is an intrinsically disordered protein.Pup是一种原核生物类泛素蛋白,是一种内在无序蛋白。
Biochem J. 2009 Aug 13;422(2):207-15. doi: 10.1042/BJ20090738.
6
Recognition and processing of ubiquitin-protein conjugates by the proteasome.蛋白酶体对泛素-蛋白质缀合物的识别与加工。
Annu Rev Biochem. 2009;78:477-513. doi: 10.1146/annurev.biochem.78.081507.101607.
7
Ubiquitin-like protein involved in the proteasome pathway of Mycobacterium tuberculosis.参与结核分枝杆菌蛋白酶体途径的类泛素蛋白。
Science. 2008 Nov 14;322(5904):1104-7. doi: 10.1126/science.1163885. Epub 2008 Oct 2.
8
ATP-dependent proteases of bacteria: recognition logic and operating principles.细菌的ATP依赖性蛋白酶:识别逻辑与作用原理
Trends Biochem Sci. 2006 Dec;31(12):647-53. doi: 10.1016/j.tibs.2006.10.006. Epub 2006 Oct 30.
9
An unstructured initiation site is required for efficient proteasome-mediated degradation.高效的蛋白酶体介导的降解需要一个非结构化的起始位点。
Nat Struct Mol Biol. 2004 Sep;11(9):830-7. doi: 10.1038/nsmb814. Epub 2004 Aug 15.
10
Proteasome sequences in eubacteria.
Trends Biochem Sci. 1994 Dec;19(12):533-4. doi: 10.1016/0968-0004(94)90054-x.