Evolutionary Genomics and Bioinformatics Laboratory, National Institute of Malaria Research, Sector 8, Dwarka, New Delhi 110 077, India.
Infect Genet Evol. 2010 Jul;10(5):620-8. doi: 10.1016/j.meegid.2010.04.002. Epub 2010 Apr 13.
Insecticide resistance (IR) is one of the major obstacles in insect pests and insect borne disease control strategies, the mechanism of which is known to be genetically controlled. Three major gene families (CYP, GST and COE) have been identified encoding various proteins to metabolize endogenous as well as exogenous compounds that are responsible for IR mechanisms in insects. Understanding evolutionary patterns of genes of such important functions could lead to important understanding, based on which, further studies to control various insect borne infectious diseases could be initiated. We herein utilized the whole genome sequence information of the malaria vector Anopheles gambiae and inferred evolutionary pattern of the three known IR gene families (CYP, GST and COE). The pattern of conservation of IR genes across 38 other taxa was determined to infer evolutionary pattern of these gene families. Chromosomal distribution of IR genes was ascertained and each individual gene of IR gene families was also mapped on the chromosomal arms of An. gambiae. Differential distributional and quantitative aspects of introns in each gene were determined and genetic architecture of genes from all three gene families was compared to draw differential evolution of IR gene families. Further, phylogenetic relationships among genes of each of the three gene families were also inferred. These results in correlation with chromosomal location of each gene have provided valuable information about evolutionary history of IR gene families.
杀虫剂抗性(IR)是昆虫和虫媒疾病控制策略中的主要障碍之一,其机制已知是由遗传控制的。已经确定了三个主要的基因家族(CYP、GST 和 COE),它们编码各种蛋白质,以代谢内源性和外源性化合物,这些化合物负责昆虫中的 IR 机制。了解这些重要功能的基因的进化模式可以基于此,进一步开展控制各种虫媒传染病的研究。我们利用疟疾传播媒介按蚊的全基因组序列信息,推断了三种已知的 IR 基因家族(CYP、GST 和 COE)的进化模式。确定了 38 个其他分类群中 IR 基因的保守模式,以推断这些基因家族的进化模式。确定了 IR 基因在染色体上的分布,并将 IR 基因家族的每个基因映射到按蚊的染色体臂上。确定了每个基因中内含子的分布和数量方面的差异,并比较了来自所有三个基因家族的基因的遗传结构,以得出 IR 基因家族的差异进化。此外,还推断了三个基因家族中每个基因的系统发育关系。这些结果与每个基因的染色体位置相关联,为 IR 基因家族的进化历史提供了有价值的信息。