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质粒 pSM19035,研究厚壁菌门稳定维持的模型。

Plasmid pSM19035, a model to study stable maintenance in Firmicutes.

机构信息

Departamento de Biotecnología Microbiana, Centro Nacional de Biotecnología, CSIC, 3, Darwin Street, 28049 Madrid, Spain.

出版信息

Plasmid. 2010 Jul;64(1):1-17. doi: 10.1016/j.plasmid.2010.04.002. Epub 2010 Apr 18.

DOI:10.1016/j.plasmid.2010.04.002
PMID:20403380
Abstract

pSM19035 is a low-copy-number theta-replicating plasmid, which belongs to the Inc18 family. Plasmids of this family, which show a modular organization, are functional in evolutionarily diverse bacterial species of the Firmicutes Phylum. This review summarizes our understanding, accumulated during the last 20 years, on the genetics, biochemistry, cytology and physiology of the five pSM19035 segregation (seg) loci, which map outside of the minimal replicon. The segA locus plays a role both in maximizing plasmid random segregation, and in avoiding replication fork collapses in those plasmids with long inverted repeated regions. The segB1 locus, which acts as the ultimate determinant of plasmid maintenance, encodes a short-lived epsilon(2) antitoxin protein and a long-lived zeta toxin protein, which form a complex that neutralizes zeta toxicity. The cells that do not receive a copy of the plasmid halt their proliferation upon decay of the epsilon(2) antitoxin. The segB2 locus, which encodes two trans-acting, ParA- and ParB-like proteins and six cis-acting parS centromeres, actively ensures equal or roughly equal distribution of plasmid copies to daughter cells. The segC locus includes functions that promote the shift from the use of DNA polymerase I to the replicase (PolC-PolE DNA polymerases). The segD locus, which encodes a trans-acting transcriptional repressor, omega(2), and six cis-acting cognate sites, coordinates the expression of genes that control copy number, better-than-random segregation and partition, and assures the proper balance of these different functions. Working in concert the five different loci achieve almost absolute plasmid maintenance with a minimal growth penalty.

摘要

pSM19035 是一种低拷贝数θ复制质粒,属于 Inc18 家族。该家族的质粒呈模块化组织,在进化上多样化的厚壁菌门细菌物种中具有功能。这篇综述总结了我们在过去 20 年中对 pSM19035 五个分离(seg)基因座的遗传学、生物化学、细胞学和生理学的理解,这些基因座位于最小复制子之外。segA 基因座在最大限度地提高质粒随机分离和避免具有长反向重复区的质粒复制叉崩溃方面都发挥作用。segB1 基因座作为质粒维持的最终决定因素,编码一种短寿命的 epsilon(2)抗毒素蛋白和一种长寿命的 zeta 毒素蛋白,它们形成一个复合物,中和 zeta 毒性。那些没有接收质粒副本的细胞在 epsilon(2)抗毒素衰减时停止增殖。segB2 基因座编码两个反式作用的 ParA 和 ParB 样蛋白和六个顺式作用的 parS 着丝粒,积极确保质粒副本在子细胞中均等或大致均等分布。segC 基因座包括促进从 DNA 聚合酶 I 到复制酶(PolC-PolE DNA 聚合酶)使用转变的功能。segD 基因座编码一个反式作用的转录抑制剂 omega(2)和六个顺式作用的同源位点,协调控制拷贝数、优于随机分离和分配的基因表达,并确保这些不同功能的适当平衡。这五个不同的基因座协同工作,几乎可以实现绝对的质粒维持,而生长代价最小。

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