Microbiology Department, Biological Science Faculty, Concepción University, P.O. Box 160-C, Concepción, Chile.
Syst Appl Microbiol. 2010 Jun;33(4):193-7. doi: 10.1016/j.syapm.2010.02.007. Epub 2010 Apr 20.
A Gram-negative, arsenite-oxidizing bacterial strain, designated VC-1, was isolated from sediment samples from the Camarones Valley in the Atacama Desert, Chile. Strain VC-1 was strictly aerobic, oxidase and catalase positive, rod shaped, of about 5.5 microm in length and 0.5-1.0 microm in diameter. It was motile by means of multiple polar flagella. The phylogenetic reconstruction of the 16S rRNA gene sequence, an MLSA study by concatenating six genes, and DDH studies indicated that the strain differed genotypically from its closest relatives and was therefore recognized as a new species within the genus Pseudomonas. Phenotypic analysis combining metabolic tests, fatty acid profiles and MALDI-TOF profiles of total cell extracts supported the classification of the new species for which we propose the designation Pseudomonas arsenicoxydans sp. nov. The type strain is accessible under the culture collection numbers CCUG 58201(T) and CECT 7543(T).
一株革兰氏阴性、亚砷酸盐氧化细菌菌株,被命名为 VC-1,从智利阿塔卡马沙漠卡马罗内斯山谷的沉积物样本中分离得到。菌株 VC-1 是严格需氧的,氧化酶和过氧化氢酶阳性,杆状,长约 5.5 微米,直径 0.5-1.0 微米。它通过多个极生鞭毛进行运动。16S rRNA 基因序列的系统发育重建、六个基因串联的 MLSA 研究和 DDH 研究表明,该菌株在基因型上与其最接近的亲缘关系不同,因此被认为是假单胞菌属中的一个新种。结合代谢试验、脂肪酸图谱和总细胞提取物的 MALDI-TOF 图谱进行的表型分析支持了新种的分类,我们建议将其命名为砷氧化假单胞菌 sp. nov.。该模式菌株可在培养物收藏编号 CCUG 58201(T) 和 CECT 7543(T)下获得。