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通过多维 NMR 快速映射全局蛋白质折叠状态:蛋白质的 GPS。

Fast mapping of global protein folding states by multivariate NMR: a GPS for proteins.

机构信息

Center for Insoluble Protein Structures, Interdisciplinary Nanoscience Center and Department of Chemistry, Aarhus University, Aarhus, Denmark.

出版信息

PLoS One. 2010 Apr 21;5(4):e10262. doi: 10.1371/journal.pone.0010262.

Abstract

To obtain insight into the functions of proteins and their specific roles, it is important to establish efficient procedures for exploring the states that encapsulate their conformational space. Global Protein folding State mapping by multivariate NMR (GPS NMR) is a powerful high-throughput method that provides such an overview. GPS NMR exploits the unique ability of NMR to simultaneously record signals from individual hydrogen atoms in complex macromolecular systems and of multivariate analysis to describe spectral variations from these by a few variables for establishment of, and positioning in, protein-folding state maps. The method is fast, sensitive, and robust, and it works without isotope-labelling. The unique capabilities of GPS NMR to identify different folding states and to compare different unfolding processes are demonstrated by mapping of the equilibrium folding space of bovine alpha-lactalbumin in the presence of the anionic surfactant sodium dodecyl sulfate, SDS, and compare these with other surfactants, acid, denaturants and heat.

摘要

为了深入了解蛋白质的功能及其特定作用,建立有效的方法来探索包含其构象空间的状态非常重要。多变量核磁共振(GPS NMR)的全局蛋白质折叠状态映射是一种强大的高通量方法,可以提供这样的概述。GPS NMR 利用 NMR 同时记录复杂大分子系统中各个氢原子信号的独特能力,以及多元分析来描述这些信号的光谱变化,仅用几个变量就可以建立蛋白质折叠状态图并定位。该方法快速、灵敏且稳健,且无需同位素标记。通过在阴离子表面活性剂十二烷基硫酸钠(SDS)存在下映射牛α-乳白蛋白的平衡折叠空间,并与其他表面活性剂、酸、变性剂和热进行比较,证明了 GPS NMR 识别不同折叠状态和比较不同展开过程的独特能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/2858079/8bc0ba4c7b1b/pone.0010262.g001.jpg

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