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巴豆酸酶催化的β-消除反应是协同进行的:一项双同位素效应研究。

Crotonase-catalyzed beta-elimination is concerted: a double isotope effect study.

作者信息

Bahnson B J, Anderson V E

机构信息

Department of Chemistry, Box H, Brown University, Providence, Rhode Island 02912.

出版信息

Biochemistry. 1991 Jun 18;30(24):5894-906. doi: 10.1021/bi00238a013.

Abstract

Determining the sequence of bond cleavages, and consequently the nature of intermediates, in enzyme-catalyzed reactions is a major goal of mechanistic enzymology. When significant primary isotope effects on V/K are observed for two different bond cleavages, both bonds may be broken in the same transition state or they can reflect two different transition states that are of nearly identical energy and consequently both are partially rate limiting. For the crotonase-catalyzed dehydration of 3-hydroxybutyrylpantetheine, the primary D(V/K) and 18(V/K) are 1.60 and 1.053 [Bahnson, B. J., & Anderson, V. E. (1989) Biochemistry 28, 4173-4181], respectively. In this case, double isotope effects can discriminate between the two possibilities [Hermes, J. D., Roeske, C. A., O'Leary, M. H., & Cleland, W. W. (1982) Biochemistry 21, 5106-5114; Belasco, J. G., Albery, W. J., & Knowles, J. R. (1983) J. Am. Chem. Soc. 105, 2475-2477]. The ratio of the alpha-secondary D(V/K) for the hydration of crotonylpantetheine catalyzed by crotonase in H2O and D2O has been determined to be 1.003 +/- 0.006. The invariance of the alpha-secondary effect where the chemical reaction is completely rate determining requires that both bond cleavages be concerted or that the substitution of 2H at the primary position not significantly alter the partitioning of a hypothetical carbanion. The observation of a solvent discrimination isotope effect determined from the relative incorporation of 2H from 50% D2O of 1.60 +/- 0.03, identical with the primary D(V/K), and the determination that the rate of exchange of the abstracted proton with solvent proceeds at less than 3% of the overall reaction rate also fail to provide evidence for a carbanion intermediate and are consistent with a concerted reaction. Identical primary D(V/K)s determined in H2O and D2O indicate that there is not a significant solvent isotope effect on C-O bond cleavage. The isotope ratios determined in these studies were performed by negative ion chemical ionization whole molecule mass spectrometry of the pentafluorobenzyl esters, a new method whose validity is established by comparison with previously determined kinetic and equilibrium isotope effects.

摘要

确定酶催化反应中键断裂的顺序以及中间体的性质是机理酶学的一个主要目标。当观察到两种不同的键断裂对V/K有显著的一级同位素效应时,这两个键可能在同一个过渡态中断裂,或者它们可以反映两个能量几乎相同的不同过渡态,因此两者都是部分限速的。对于巴豆酸酶催化的3-羟基丁酰泛酰巯基乙胺脱水反应,一级D(V/K)和18(V/K)分别为1.60和1.053 [Bahnson, B. J., & Anderson, V. E. (1989) Biochemistry 28, 4173 - 4181]。在这种情况下,双同位素效应可以区分这两种可能性[Hermes, J. D., Roeske, C. A., O'Leary, M. H., & Cleland, W. W. (1982) Biochemistry 21, 5106 - 5114; Belasco, J. G., Albery, W. J., & Knowles, J. R. (1983) J. Am. Chem. Soc. 105, 2475 - 2477]。已确定巴豆酸酶在H2O和D2O中催化巴豆酰泛酰巯基乙胺水合反应的α-二级D(V/K)比值为1.003±0.006。在化学反应完全限速的情况下,α-二级效应不变,这要求两个键的断裂是协同的,或者一级位置上2H的取代不会显著改变假设的碳负离子的分配。从50% D2O中2H的相对掺入量确定的溶剂区分同位素效应为1.60±0.03,与一级D(V/K)相同,并且确定被夺取的质子与溶剂的交换速率低于总反应速率的3%,这也没有提供碳负离子中间体的证据,并且与协同反应一致。在H2O和D2O中确定的相同的一级D(V/K)表明,C - O键断裂不存在显著的溶剂同位素效应。这些研究中确定的同位素比值是通过五氟苄基酯的负离子化学电离全分子质谱法进行的,这是一种新方法,其有效性通过与先前确定的动力学和平衡同位素效应进行比较得以确立。

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