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来自嗜热菌 Aquifex aeolicus 的膜结合氢化酶 I:酶激活、氧化还原中间产物和耐氧性。

Membrane-bound hydrogenase I from the hyperthermophilic bacterium Aquifex aeolicus: enzyme activation, redox intermediates and oxygen tolerance.

机构信息

Max-Planck-Institut für Bioanorganische Chemie, Stiftstrasse 34-36, D45470, Mülheim a.d. Ruhr, Germany.

出版信息

J Am Chem Soc. 2010 May 26;132(20):6991-7004. doi: 10.1021/ja910838d.

DOI:10.1021/ja910838d
PMID:20441192
Abstract

The membrane-bound hydrogenase (Hase I) of the hyperthermophilic bacterium Aquifex aeolicus belongs to an intriguing class of redox enzymes that show enhanced thermostability and oxygen tolerance. Protein film electrochemistry is employed here to portray the interaction of Hase I with molecular oxygen and obtain an overall picture of the catalytic activity. Fourier transform infrared (FTIR) spectroscopy integrated with in situ electrochemistry is used to identify structural details of the [NiFe] site and the intermediate states involved in its redox chemistry. We found that the active site coordination is similar to that of standard hydrogenases, with a conserved Fe(CN)(2)CO moiety. However, only four catalytic intermediates could be detected; these correspond structurally to the Ni-B, Ni-SI(a), Ni-C, and Ni-R states of standard hydrogenases. The Ni-SI/Ni-C and Ni-C/Ni-R midpoint potentials are approximately 100 mV more positive than those observed in mesophilic hydrogenases, which may be the reason that A. aeolicus Hase I is more suitable as a catalyst for H(2) oxidation than production. Protein film electrochemistry shows that oxygen inhibits the enzyme by reacting at the active site to form a single species (Ni-B); the same inactive state is obtained under oxidizing, anaerobic conditions. The mechanism of anaerobic inactivation and reactivation in A. aeolicus Hase I is similar to that in standard hydrogenases. However, the reactivation of the former is more than 2 orders of magnitude faster despite the fact that reduction of Ni-B is not thermodynamically more favorable. A scheme for the enzymatic mechanism of A. aeolicus Hase I is presented, and the results are discussed in relation to the proposed models of oxygen tolerance.

摘要

嗜热菌 Aquifex aeolicus 的膜结合氢化酶(Hase I)属于一类引人入胜的氧化还原酶,其具有增强的热稳定性和耐氧性。本文采用蛋白质膜电化学技术来描绘 Hase I 与分子氧的相互作用,并获得其催化活性的整体图景。傅里叶变换红外(FTIR)光谱学与原位电化学相结合,用于鉴定[NiFe]位点的结构细节及其氧化还原化学中的中间状态。我们发现,活性位点的配位类似于标准氢化酶,具有保守的 Fe(CN)(2)CO 部分。然而,仅能检测到四个催化中间物;这些中间物在结构上对应于标准氢化酶的 Ni-B、Ni-SI(a)、Ni-C 和 Ni-R 状态。Ni-SI/Ni-C 和 Ni-C/Ni-R 的中点电位比中温氢化酶中观察到的高出约 100 mV,这可能是 A. aeolicus Hase I 更适合作为 H(2)氧化催化剂而不是生产催化剂的原因。蛋白质膜电化学表明,氧气通过在活性位点反应形成单一物种(Ni-B)来抑制酶;在氧化、厌氧条件下也会获得相同的失活状态。A. aeolicus Hase I 中厌氧失活和再激活的机制与标准氢化酶相似。然而,尽管 Ni-B 的还原在热力学上没有更有利,但前者的再激活速度快于 2 个数量级。提出了 A. aeolicus Hase I 的酶促机制方案,并讨论了结果与提出的耐氧性模型的关系。

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