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寄生虫学中代谢组学的演变。

The evolution of metabolic profiling in parasitology.

机构信息

Biomolecular Medicine, Department of Surgery and Cancer, Imperial College, London SW7 2AZ.

出版信息

Parasitology. 2010 Aug;137(9):1437-49. doi: 10.1017/S0031182010000260. Epub 2010 May 5.

Abstract

The uses of metabolic profiling technologies such as mass spectrometry and nuclear magnetic resonance spectroscopy in parasitology have been multi-faceted. Traditional uses of spectroscopic platforms focused on determining the chemical composition of drugs or natural products used for treatment of parasitic infection. A natural progression of the use of these tools led to the generation of chemical profiles of the parasite in in vitro systems, monitoring the response of the parasite to chemotherapeutics, profiling metabolic consequences in the host organism and to deriving host-parasite interactions. With the dawn of the post-genomic era the paradigm in many research areas shifted towards Systems Biology and the integration of biomolecular interactions at the level of the gene, protein and metabolite. Although these technologies have yet to deliver their full potential, metabolic profiling has a key role to play in defining diagnostic or even prognostic metabolic signatures of parasitic infection and in deciphering the molecular mechanisms underpinning the development of parasite-induced pathologies. The strengths and weaknesses of the various spectroscopic technologies and analytical strategies are summarized here with respect to achieving these goals.

摘要

代谢组学技术(如质谱和核磁共振波谱学)在寄生虫学中的应用具有多方面的特点。传统的光谱平台的应用重点是确定用于寄生虫感染治疗的药物或天然产物的化学成分。这些工具的使用的自然发展导致了寄生虫在体外系统中的化学特征的产生,监测寄生虫对化疗药物的反应,对宿主生物体中的代谢后果进行分析,并得出宿主-寄生虫相互作用。随着后基因组时代的到来,许多研究领域的范式转向了系统生物学,并整合了基因、蛋白质和代谢物水平上的生物分子相互作用。尽管这些技术尚未充分发挥其潜力,但代谢组学在定义寄生虫感染的诊断甚至预后代谢特征以及破译寄生虫诱导的病理发展的分子机制方面发挥着关键作用。本文总结了各种光谱技术和分析策略在实现这些目标方面的优缺点。

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