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本文引用的文献

1
Genome-wide association study identifies five susceptibility loci for glioma.全基因组关联研究确定了五个胶质瘤易感位点。
Nat Genet. 2009 Aug;41(8):899-904. doi: 10.1038/ng.407. Epub 2009 Jul 5.
2
Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility.CDKN2B和RTEL1区域的变异与高级别胶质瘤易感性相关。
Nat Genet. 2009 Aug;41(8):905-8. doi: 10.1038/ng.408. Epub 2009 Jul 5.
3
Genome-wide association study identifies variants at 9p21 and 22q13 associated with development of cutaneous nevi.全基因组关联研究确定了与皮肤痣发生相关的9p21和22q13区域的变异。
Nat Genet. 2009 Aug;41(8):915-9. doi: 10.1038/ng.410. Epub 2009 Jul 5.
4
Genome-wide association study identifies three loci associated with melanoma risk.全基因组关联研究确定了三个与黑色素瘤风险相关的基因座。
Nat Genet. 2009 Aug;41(8):920-5. doi: 10.1038/ng.411. Epub 2009 Jul 5.
5
New common variants affecting susceptibility to basal cell carcinoma.影响基底细胞癌易感性的新常见变异体。
Nat Genet. 2009 Aug;41(8):909-14. doi: 10.1038/ng.412. Epub 2009 Jul 5.
6
Risk of estrogen receptor-positive and -negative breast cancer and single-nucleotide polymorphism 2q35-rs13387042.雌激素受体阳性和阴性乳腺癌风险与单核苷酸多态性2q35-rs13387042
J Natl Cancer Inst. 2009 Jul 15;101(14):1012-8. doi: 10.1093/jnci/djp167. Epub 2009 Jun 30.
7
INK4/ARF transcript expression is associated with chromosome 9p21 variants linked to atherosclerosis.INK4/ARF转录本表达与与动脉粥样硬化相关的9号染色体p21区域变异有关。
PLoS One. 2009;4(4):e5027. doi: 10.1371/journal.pone.0005027. Epub 2009 Apr 3.
8
A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1).一项针对乳腺癌的多阶段全基因组关联研究在1p11.2和14q24.1(RAD51L1)发现了两个新的风险等位基因。
Nat Genet. 2009 May;41(5):579-84. doi: 10.1038/ng.353. Epub 2009 Mar 29.
9
Newly discovered breast cancer susceptibility loci on 3p24 and 17q23.2.3p24和17q23.2上新发现的乳腺癌易感基因座。
Nat Genet. 2009 May;41(5):585-90. doi: 10.1038/ng.354. Epub 2009 Mar 29.
10
FGFR2 variants and breast cancer risk: fine-scale mapping using African American studies and analysis of chromatin conformation.FGFR2基因变异与乳腺癌风险:利用非裔美国人研究进行精细定位及染色质构象分析
Hum Mol Genet. 2009 May 1;18(9):1692-703. doi: 10.1093/hmg/ddp078. Epub 2009 Feb 17.

全基因组关联研究鉴定出五个新的乳腺癌易感性位点。

Genome-wide association study identifies five new breast cancer susceptibility loci.

机构信息

Section of Cancer Genetics, The Institute of Cancer Research, Sutton, Surrey, UK.

出版信息

Nat Genet. 2010 Jun;42(6):504-7. doi: 10.1038/ng.586. Epub 2010 May 9.

DOI:10.1038/ng.586
PMID:20453838
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3632836/
Abstract

Breast cancer is the most common cancer in women in developed countries. To identify common breast cancer susceptibility alleles, we conducted a genome-wide association study in which 582,886 SNPs were genotyped in 3,659 cases with a family history of the disease and 4,897 controls. Promising associations were evaluated in a second stage, comprising 12,576 cases and 12,223 controls. We identified five new susceptibility loci, on chromosomes 9, 10 and 11 (P = 4.6 x 10(-7) to P = 3.2 x 10(-15)). We also identified SNPs in the 6q25.1 (rs3757318, P = 2.9 x 10(-6)), 8q24 (rs1562430, P = 5.8 x 10(-7)) and LSP1 (rs909116, P = 7.3 x 10(-7)) regions that showed more significant association with risk than those reported previously. Previously identified breast cancer susceptibility loci were also found to show larger effect sizes in this study of familial breast cancer cases than in previous population-based studies, consistent with polygenic susceptibility to the disease.

摘要

在发达国家,乳腺癌是女性最常见的癌症。为了鉴定常见的乳腺癌易感等位基因,我们进行了一项全基因组关联研究,对 3659 例有家族病史的病例和 4897 例对照者的 582886 个 SNP 进行了基因分型。在第二阶段,对包含 12576 例病例和 12223 例对照者的样本进行了有前途的关联评估。我们在染色体 9、10 和 11 上鉴定到了五个新的易感位点(P = 4.6 x 10(-7) 至 P = 3.2 x 10(-15))。我们还在 6q25.1(rs3757318,P = 2.9 x 10(-6))、8q24(rs1562430,P = 5.8 x 10(-7))和 LSP1(rs909116,P = 7.3 x 10(-7))区域鉴定到了与风险相关的 SNP,其关联比以前报道的更为显著。本研究还发现,以前鉴定到的乳腺癌易感位点在家族性乳腺癌病例的研究中比以前基于人群的研究中显示出更大的效应大小,这与疾病的多基因易感性一致。