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应用环化探针实时聚合酶链反应检测和定量角膜溃疡患者的病原菌和真菌。

Detection and quantification of pathogenic bacteria and fungi using real-time polymerase chain reaction by cycling probe in patients with corneal ulcer.

作者信息

Itahashi Motoki, Higaki Shiro, Fukuda Masahiko, Shimomura Yoshikazu

机构信息

Department of Ophthalmology, Kinki University School of Medicine, 377-2 Ohno-Higashi, Osaka-Sayama 589-8511, Japan.

出版信息

Arch Ophthalmol. 2010 May;128(5):535-40. doi: 10.1001/archophthalmol.2010.66.

DOI:10.1001/archophthalmol.2010.66
PMID:20457973
Abstract

OBJECTIVE

To detect and quantitate the causative pathogens in patients with corneal ulcer using real-time polymerase chain reaction (PCR) by cycling probe.

DESIGN

Clinical and laboratory study of 40 eyes of 40 patients diagnosed with corneal ulcer. Two methods were used for pathogen detection: bacterial culture and real-time PCR with the patient's corneal scrapings. Probes and primers of real-time PCR were designed to be pathogen specific for simultaneous detection of Staphylococcus aureus, Staphylococcus pneumoniae, Pseudomonas aeruginosa, methicillin-resistant S aureus, Candida species, and Fusarium species. Results by both methods were evaluated and compared.

RESULTS

Of 40 eyes, 20 eyes had the same pathogens detected by both methods and those were S aureus (3 eyes; mean [SE], 3.8 [1.3] x 10(1) copies/sample), S pneumoniae (5 eyes; mean [SE], 5.6 [5.1] x 10(3) copies/sample), P aeruginosa (8 eyes; 5.1 [4.0] x 10(3) copies/sample), methicillin-resistant S aureus (1 eye; 1.0 x 10(2) copies/sample), and Candida species (3 eyes; mean [SE], 8.8 [4.9] x 10(3) copies/sample). Six eyes showed negative results by both methods. Results of both methods disagreed in 14 eyes; specifically, 11 had positive PCR results only, 2 had positive culture results only, and 1 eye had positive results for different pathogens.

CONCLUSIONS

The real-time PCR assay can simultaneously detect and quantitate bacterial and fungal pathogens in patients with corneal ulcer. Real-time PCR can be a fast diagnostic tool and may be useful as an adjunct to identify potential pathogens.

摘要

目的

采用循环探针实时聚合酶链反应(PCR)检测并定量分析角膜溃疡患者的致病病原体。

设计

对40例诊断为角膜溃疡的患者的40只眼进行临床和实验室研究。采用两种方法进行病原体检测:细菌培养以及对患者角膜刮片进行实时PCR检测。实时PCR的探针和引物设计为针对金黄色葡萄球菌、肺炎链球菌、铜绿假单胞菌、耐甲氧西林金黄色葡萄球菌、念珠菌属和镰刀菌属的病原体特异性探针和引物。对两种方法的结果进行评估和比较。

结果

在40只眼中,20只眼通过两种方法检测出相同的病原体,分别为金黄色葡萄球菌(3只眼;平均值[标准误],3.8[1.3]×10¹拷贝/样本)、肺炎链球菌(5只眼;平均值[标准误],5.6[5.1]×10³拷贝/样本)、铜绿假单胞菌(8只眼;5.1[4.0]×10³拷贝/样本)、耐甲氧西林金黄色葡萄球菌(1只眼;1.0×10²拷贝/样本)和念珠菌属(3只眼;平均值[标准误],8.8[4.9]×10³拷贝/样本)。6只眼两种方法检测结果均为阴性。两种方法的结果在14只眼中不一致;具体而言,11只眼仅PCR结果为阳性,2只眼仅培养结果为阳性,1只眼针对不同病原体结果为阳性。

结论

实时PCR检测可同时检测并定量分析角膜溃疡患者的细菌和真菌病原体。实时PCR可作为一种快速诊断工具,可能有助于辅助识别潜在病原体。

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