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高效生产、复性与分子建模的(1,3)-β-D-葡聚糖(芝聚糖)合酶催化模块来自农杆菌属

High-yield production, refolding and a molecular modelling of the catalytic module of (1,3)-beta-D-glucan (curdlan) synthase from Agrobacterium sp.

机构信息

Australian Centre for Plant Functional Genomics, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA, 5064, Australia.

出版信息

Glycoconj J. 2010 May;27(4):461-76. doi: 10.1007/s10719-010-9291-4. Epub 2010 May 16.

Abstract

Biosynthesis of the (1,3)-beta-D: -glucan (curdlan) in Agrobacterium sp., is believed to proceed by the repetitive addition of glucosyl residues from UDP-glucose by a membrane-embedded curdlan synthase (CrdS) [UDP-glucose: (1,3)-beta-D: -glucan 3-beta-D: -glucosyltransferase; EC 2.4.1.34]. The catalytic module of CrdS (cm-CrdS) was expressed in good yield from a cDNA encoding cm-CrdS cloned into the pET-32a(+) vector, containing a coding region for thioredoxin, and from the Champion pET SUMO system that possesses a coding region of a small ubiquitin-related modifier (SUMO) partner protein. The two DNA fusions, designated pET-32a_cm-CrdS and SUMO_cm-CrdS were expressed as chimeric proteins. High yields of inclusion bodies were produced in E. coli and these could be refolded to form soluble proteins, using a range of buffers and non-detergent sulfobetaines. A purification protocol was developed, which afforded a one-step on-column refolding and simultaneous purification of the recombinant 6xHis-tagged SUMO_cm-CrdS protein. The latter protein was digested by a specific protease to yield intact cm-CrdS in high yields. The refolded SUMO_cm-CrdS protein did not exhibit curdlan synthase activity, but showed a circular dischroism spectrum, which had an alpha/beta-type-like conformation. Amino acid sequences of tryptic fragments of the SUMO_cm-CrdS fusion and free cm-CrdS proteins, determined by MALDI/TOF confirmed that the full-length proteins were synthesized by E. coli, and that no alterations in amino acid sequences occurred. A three-dimensional model of cm-CrdS predicted the juxtaposition of highly conserved aspartates D156, D208, D210 and D304, and the QRTRW motif, which are likely to play roles in donor and acceptor substrate binding and catalysis.

摘要

在根癌农杆菌中,(1,3)-β-D:-葡聚糖(结冷胶)的生物合成被认为是通过膜嵌入的结冷胶合酶(CrdS)[UDP-葡萄糖:(1,3)-β-D:-葡聚糖 3-β-D:-葡糖苷基转移酶;EC 2.4.1.34]从 UDP-葡萄糖重复添加葡萄糖残基进行的。CrdS 的催化模块(cm-CrdS)从编码 cm-CrdS 的 cDNA 在 pET-32a(+)载体中表达,该 cDNA 克隆包含硫氧还蛋白的编码区,并从 Champion pET SUMO 系统表达,该系统具有小泛素相关修饰物(SUMO)伴侣蛋白的编码区。这两个 DNA 融合体,分别命名为 pET-32a_cm-CrdS 和 SUMO_cm-CrdS,被表达为嵌合蛋白。在大肠杆菌中产生了高产量的包涵体,这些包涵体可以使用一系列缓冲液和非离子型去垢剂磺基甜菜碱进行复性形成可溶性蛋白。开发了一种纯化方案,该方案提供了一步柱上复性和同时纯化重组 6xHis 标记的 SUMO_cm-CrdS 蛋白。该蛋白被一种特定的蛋白酶消化,以高产率获得完整的 cm-CrdS。复性的 SUMO_cm-CrdS 蛋白没有表现出结冷胶合酶活性,但表现出圆二色光谱,具有 α/β 型样构象。通过 MALDI/TOF 确定的 SUMO_cm-CrdS 融合和游离 cm-CrdS 蛋白的胰蛋白酶片段的氨基酸序列证实,全长蛋白是由大肠杆菌合成的,并且氨基酸序列没有发生变化。cm-CrdS 的三维模型预测了高度保守的天冬氨酸 D156、D208、D210 和 D304 以及 QRTRW 基序的并置,这些基序可能在供体和受体底物结合和催化中起作用。

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