Jinan University, Guangzhou, China.
Int J Mol Sci. 2010 Mar 2;11(3):880-95. doi: 10.3390/ijms11030880.
Andrographolide derivatives were shown to inhibit alpha-glucosidase. To investigate the relationship between activities and structures of andrographolide derivatives, a training set was chosen from 25 andrographolide derivatives by the principal component analysis (PCA) method, and a quantitative structure-activity relationship (QSAR) was established by 2D and 3D QSAR methods. The cross-validation r(2) (0.731) and standard error (0.225) illustrated that the 2D-QSAR model was able to identify the important molecular fragments and the cross-validation r(2) (0.794) and standard error (0.127) demonstrated that the 3D-QSAR model was capable of exploring the spatial distribution of important fragments. The obtained results suggested that proposed combination of 2D and 3D QSAR models could be useful in predicting the alpha-glucosidase inhibiting activity of andrographolide derivatives.
穿心莲内酯衍生物被证明能抑制α-葡萄糖苷酶。为了研究穿心莲内酯衍生物的活性与结构之间的关系,通过主成分分析(PCA)方法从 25 种穿心莲内酯衍生物中选择了一个训练集,并通过二维和三维定量构效关系(QSAR)方法建立了定量构效关系。交叉验证 r(2)(0.731)和标准误差(0.225)表明,二维 QSAR 模型能够识别重要的分子片段,交叉验证 r(2)(0.794)和标准误差(0.127)表明,三维 QSAR 模型能够探索重要片段的空间分布。研究结果表明,所提出的二维和三维 QSAR 模型的组合可用于预测穿心莲内酯衍生物的α-葡萄糖苷酶抑制活性。