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α-螺旋和β-折叠构象肽的相图。

Phase diagram of alpha-helical and beta-sheet forming peptides.

机构信息

Centre for Molecular Nanoscience, University of Leeds, Leeds LS2 9JT, United Kingdom.

出版信息

Phys Rev Lett. 2010 Apr 23;104(16):168105. doi: 10.1103/PhysRevLett.104.168105.

Abstract

The intrinsic property of proteins to form structural motifs such as alpha helices and beta sheets leads to a complex phase behavior in which proteins can assemble into various types of aggregates including crystals, liquidlike phases of unfolded or natively folded proteins, and amyloid fibrils. Here we use a coarse-grained protein model that enables us to perform Monte Carlo simulations for determining the phase diagram of natively folded alpha-helical and unfolded beta-sheet forming peptides. The simulations reveal the existence of various metastable peptide phases. The liquidlike phases are metastable with respect to the fibrillar phases, and there is a hierarchy of metastability.

摘要

蛋白质形成结构基序(如α螺旋和β折叠)的固有特性导致了复杂的相行为,其中蛋白质可以组装成各种类型的聚集体,包括晶体、未折叠或天然折叠蛋白质的液态相以及淀粉样纤维。在这里,我们使用了一种粗粒化的蛋白质模型,使我们能够进行蒙特卡罗模拟,以确定天然折叠的α螺旋和展开的β折叠肽的相图。模拟揭示了各种亚稳态肽相的存在。液态相对于纤维状相是亚稳态的,并且存在亚稳性的层次结构。

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