School of Molecular Bioscience, University of Sydney, New South Wales 2006, Australia.
J Mol Biol. 2010 Jul 23;400(4):702-14. doi: 10.1016/j.jmb.2010.05.022. Epub 2010 May 19.
The MA protein from HIV-1 is a small, multifunctional protein responsible for regulating various stages of the viral replication cycle. To achieve its diverse tasks, MA interacts with host cell proteins and it has been reported that one of these is the ubiquitous calcium-sensing calmodulin (CaM), which is up-regulated upon HIV-1 infection. The nature of the CaM-MA interaction has been the subject of structural studies, using peptides based on the MA sequence, that have led to conflicting conclusions. The results presented here show that CaM binds intact MA with 1:1 stoichiometry in a Ca(2+)-dependent manner and that the complex adopts a highly extended conformation in solution as revealed by small-angle X-ray scattering. Alterations in tryptophan fluorescence suggest that the two buried tryptophans (W16 and W36) located in the first two alpha-helices of MA mediate the CaM interaction. Major chemical shift changes occur in the NMR spectrum of MA upon complex formation, whereas chemical shift changes in the CaM spectrum are quite modest and are assigned to residues within the normal target protein-binding hydrophobic clefts of CaM. The NMR data indicate that CaM binds MA via its N- and C-terminal lobes and induces a dramatic conformational change involving a significant loss of secondary and tertiary structure within MA. Circular dichroism experiments suggest that MA loses approximately 20% of its alpha-helical content upon CaM binding. Thus, CaM binding is expected to impact upon the accessibility of interaction sites within MA that are involved in its various functions.
HIV-1 的 MA 蛋白是一种小型多功能蛋白,负责调节病毒复制周期的各个阶段。为了实现其多样化的任务,MA 与宿主细胞蛋白相互作用,据报道其中一种是普遍存在的钙敏感受体钙调蛋白(CaM),它在 HIV-1 感染后上调。CaM-MA 相互作用的性质一直是结构研究的主题,使用基于 MA 序列的肽进行了研究,但得出了相互矛盾的结论。这里呈现的结果表明,CaM 以 Ca2+依赖的方式以 1:1 的化学计量比结合完整的 MA,并且该复合物在溶液中采用高度伸展的构象,如小角度 X 射线散射所揭示的。色氨酸荧光的变化表明,位于 MA 的前两个α螺旋中的两个埋藏色氨酸(W16 和 W36)介导了 CaM 相互作用。在复合物形成时,MA 的 NMR 光谱发生主要的化学位移变化,而 CaM 光谱的化学位移变化相当温和,并且被分配给 CaM 中正常靶蛋白结合疏水性裂缝内的残基。NMR 数据表明,CaM 通过其 N 和 C 末端叶与 MA 结合,并诱导涉及 MA 内二级和三级结构显著损失的剧烈构象变化。圆二色性实验表明,MA 在与 CaM 结合时失去了大约 20%的α-螺旋含量。因此,预计 CaM 结合会影响 MA 中参与其各种功能的相互作用位点的可及性。