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, a program for rapid shape determination in small-angle scattering.用于小角散射中快速形状测定的一个程序。
J Appl Crystallogr. 2009 Apr 1;42(Pt 2):342-346. doi: 10.1107/S0021889809000338. Epub 2009 Jan 24.
2
Opposing mechanisms involving RNA and lipids regulate HIV-1 Gag membrane binding through the highly basic region of the matrix domain.涉及 RNA 和脂质的拮抗机制通过基质域的高度碱性区域调节 HIV-1 Gag 膜结合。
Proc Natl Acad Sci U S A. 2010 Jan 26;107(4):1600-5. doi: 10.1073/pnas.0908661107. Epub 2010 Jan 4.
3
Calmodulin wraps around its binding domain in the plasma membrane Ca2+ pump anchored by a novel 18-1 motif.钙调蛋白围绕其结合域缠绕,该结合域位于由新型 18-1 基序锚定的质膜 Ca2+泵上。
J Biol Chem. 2010 Feb 5;285(6):4015-4024. doi: 10.1074/jbc.M109.060491. Epub 2009 Dec 7.
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A picornaviral loop-to-loop replication complex.一种微小核糖核酸病毒的环对环复制复合体。
J Struct Biol. 2009 Jun;166(3):251-62. doi: 10.1016/j.jsb.2009.02.010. Epub 2009 Mar 4.
5
Solution X-ray scattering reveals a novel structure of calmodulin complexed with a binding domain peptide from the HIV-1 matrix protein p17.溶液X射线散射揭示了与来自HIV-1基质蛋白p17的结合域肽复合的钙调蛋白的新结构。
Biochemistry. 2008 Jul 8;47(27):7158-66. doi: 10.1021/bi702416b. Epub 2008 Jun 14.
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Small-angle X-ray scattering reveals the N-terminal domain organization of cardiac myosin binding protein C.小角X射线散射揭示了心肌肌球蛋白结合蛋白C的N端结构域组织。
J Mol Biol. 2008 Apr 4;377(4):1186-99. doi: 10.1016/j.jmb.2008.01.080. Epub 2008 Feb 4.
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The N-terminal basic domain of the HIV-1 matrix protein does not contain a conventional nuclear localization sequence but is required for DNA binding and protein self-association.HIV-1 基质蛋白的 N 端碱性结构域不包含传统的核定位序列,但对于 DNA 结合和蛋白质自我缔合是必需的。
Biochemistry. 2008 Feb 19;47(7):2199-210. doi: 10.1021/bi701360j. Epub 2008 Jan 29.
8
Crystal structure of apo-calmodulin bound to the first two IQ motifs of myosin V reveals essential recognition features.与肌球蛋白V的前两个IQ模体结合的脱钙调蛋白的晶体结构揭示了关键的识别特征。
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Structural basis for targeting HIV-1 Gag proteins to the plasma membrane for virus assembly.将HIV-1 Gag蛋白靶向质膜进行病毒组装的结构基础。
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10
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钙调蛋白破坏 HIV-1 衣壳蛋白的结构。

Calmodulin disrupts the structure of the HIV-1 MA protein.

机构信息

School of Molecular Bioscience, University of Sydney, New South Wales 2006, Australia.

出版信息

J Mol Biol. 2010 Jul 23;400(4):702-14. doi: 10.1016/j.jmb.2010.05.022. Epub 2010 May 19.

DOI:10.1016/j.jmb.2010.05.022
PMID:20488189
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2902600/
Abstract

The MA protein from HIV-1 is a small, multifunctional protein responsible for regulating various stages of the viral replication cycle. To achieve its diverse tasks, MA interacts with host cell proteins and it has been reported that one of these is the ubiquitous calcium-sensing calmodulin (CaM), which is up-regulated upon HIV-1 infection. The nature of the CaM-MA interaction has been the subject of structural studies, using peptides based on the MA sequence, that have led to conflicting conclusions. The results presented here show that CaM binds intact MA with 1:1 stoichiometry in a Ca(2+)-dependent manner and that the complex adopts a highly extended conformation in solution as revealed by small-angle X-ray scattering. Alterations in tryptophan fluorescence suggest that the two buried tryptophans (W16 and W36) located in the first two alpha-helices of MA mediate the CaM interaction. Major chemical shift changes occur in the NMR spectrum of MA upon complex formation, whereas chemical shift changes in the CaM spectrum are quite modest and are assigned to residues within the normal target protein-binding hydrophobic clefts of CaM. The NMR data indicate that CaM binds MA via its N- and C-terminal lobes and induces a dramatic conformational change involving a significant loss of secondary and tertiary structure within MA. Circular dichroism experiments suggest that MA loses approximately 20% of its alpha-helical content upon CaM binding. Thus, CaM binding is expected to impact upon the accessibility of interaction sites within MA that are involved in its various functions.

摘要

HIV-1 的 MA 蛋白是一种小型多功能蛋白,负责调节病毒复制周期的各个阶段。为了实现其多样化的任务,MA 与宿主细胞蛋白相互作用,据报道其中一种是普遍存在的钙敏感受体钙调蛋白(CaM),它在 HIV-1 感染后上调。CaM-MA 相互作用的性质一直是结构研究的主题,使用基于 MA 序列的肽进行了研究,但得出了相互矛盾的结论。这里呈现的结果表明,CaM 以 Ca2+依赖的方式以 1:1 的化学计量比结合完整的 MA,并且该复合物在溶液中采用高度伸展的构象,如小角度 X 射线散射所揭示的。色氨酸荧光的变化表明,位于 MA 的前两个α螺旋中的两个埋藏色氨酸(W16 和 W36)介导了 CaM 相互作用。在复合物形成时,MA 的 NMR 光谱发生主要的化学位移变化,而 CaM 光谱的化学位移变化相当温和,并且被分配给 CaM 中正常靶蛋白结合疏水性裂缝内的残基。NMR 数据表明,CaM 通过其 N 和 C 末端叶与 MA 结合,并诱导涉及 MA 内二级和三级结构显著损失的剧烈构象变化。圆二色性实验表明,MA 在与 CaM 结合时失去了大约 20%的α-螺旋含量。因此,预计 CaM 结合会影响 MA 中参与其各种功能的相互作用位点的可及性。