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嗜热栖热菌异丙基苹果酸脱氢酶各种酶-底物复合物的结晶及初步X射线衍射分析

Crystallization and preliminary X-ray diffraction analysis of various enzyme-substrate complexes of isopropylmalate dehydrogenase from Thermus thermophilus.

作者信息

Merli Angelo, Manikandan Karuppasamy, Gráczer Eva, Schuldt Linda, Singh Rajesh Kumar, Závodszky Péter, Vas Mária, Weiss Manfred S

机构信息

Department of Biochemistry and Molecular Biology, University of Parma, Viale G. P. Usberti 23/A, 43100 Parma, Italy.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jun 1;66(Pt 6):738-43. doi: 10.1107/S174430911001626X. Epub 2010 May 29.

Abstract

The Thermus thermophilus 3-isopropylmalate dehydrogenase (Tt-IPMDH) enzyme catalyses the penultimate step of the leucine-biosynthesis pathway. It converts (2R,3S)-3-isopropylmalate to (2S)-2-isopropyl-3-oxosuccinate in the presence of divalent Mg(2+) or Mn(2+) and with the help of NAD(+). In order to elucidate the detailed structural and functional mode of the enzymatic reaction, crystals of Tt-IPMDH were grown in the presence of various combinations of substrate and/or cofactors. Here, the crystallization, data collection and preliminary crystallographic analyses of six such complexes are reported.

摘要

嗜热栖热菌3-异丙基苹果酸脱氢酶(Tt-IPMDH)催化亮氨酸生物合成途径的倒数第二步反应。在二价镁离子(Mg(2+))或锰离子(Mn(2+))存在的情况下,借助烟酰胺腺嘌呤二核苷酸(NAD(+)),它将(2R,3S)-3-异丙基苹果酸转化为(2S)-2-异丙基-3-氧代琥珀酸。为了阐明酶促反应的详细结构和功能模式,在底物和/或辅因子的各种组合存在的情况下培养了Tt-IPMDH晶体。在此,报道了六种此类复合物的结晶、数据收集和初步晶体学分析。

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