• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

秘鲁和智利北部(该测序基因组株的起源地)的泡叶藻(泡叶藻目,褐藻门)的遗传多样性。

Genetic diversity of Ectocarpus (Ectocarpales, Phaeophyceae) in Peru and northern Chile, the area of origin of the genome-sequenced strain.

机构信息

Marine Biological Association, Citadel Hill, Plymouth PL1 2PB, UK.

出版信息

New Phytol. 2010 Oct;188(1):30-41. doi: 10.1111/j.1469-8137.2010.03303.x. Epub 2010 Jun 1.

DOI:10.1111/j.1469-8137.2010.03303.x
PMID:20524993
Abstract

• The origin of the Ectocarpus strain used for genome sequencing (the 'genome strain') was Peru, where no Ectocarpus had been reported previously. To study the genetic diversity in the region and to increase the number of individuals from this area available for genetic experiments, 119 new Ectocarpus strains were isolated from eight localities along the 3000  km of coastline from central Peru to central Chile. • Internal transcribed spacer 1 (ITS1) genotyping revealed nine different genotypes, five of which were endemic to the area studied and three of which were previously unknown. • Individuals of the same genotype as the genome strain occurred from Peru to northernmost Chile, representing 61% of the samples in this area, from which five more genotypes were isolated. Further south, down to central Chile, most individuals belonged to Ectocarpus siliculosus, Ectocarpus fasciculatus and Ectocarpus crouaniorum. In sexual crosses, the genome strain and the new isolates of the same genotype were fully compatible. • Sequences from four nuclear and cytoplasmic genetic markers (ITS1, ITS2, Rubisco spacer and Cytochrome-c oxidase subunit 3 (cox3)) separated the genome strain from the known species of Ectocarpus. It may in future be recognized as a separate species.

摘要

• 用于基因组测序的浒苔品系(“基因组品系”)的起源地是秘鲁,此前那里没有报道过浒苔。为了研究该地区的遗传多样性,并增加该地区可用于遗传实验的个体数量,从秘鲁中部到智利中部的 3000 公里海岸线的 8 个地点分离了 119 个新的浒苔品系。• 内部转录间隔区 1(ITS1)基因分型显示有 9 种不同的基因型,其中 5 种是该地区特有的,3 种是以前未知的。• 与基因组品系相同基因型的个体从秘鲁到智利最北部都有出现,代表了该地区 61%的样本,从中又分离出了另外 5 种基因型。再往南,到智利中部,大多数个体属于石莼、石莼和石莼。在有性杂交中,基因组品系和相同基因型的新分离株完全兼容。• 来自四个核和细胞质遗传标记(ITS1、ITS2、Rubisco 间隔区和细胞色素 c 氧化酶亚基 3(cox3)的序列将基因组品系与已知的浒苔物种区分开来。它将来可能被认定为一个独立的物种。

相似文献

1
Genetic diversity of Ectocarpus (Ectocarpales, Phaeophyceae) in Peru and northern Chile, the area of origin of the genome-sequenced strain.秘鲁和智利北部(该测序基因组株的起源地)的泡叶藻(泡叶藻目,褐藻门)的遗传多样性。
New Phytol. 2010 Oct;188(1):30-41. doi: 10.1111/j.1469-8137.2010.03303.x. Epub 2010 Jun 1.
2
Species delimitation and phylogeographic analyses in the Ectocarpus subgroup siliculosi (Ectocarpales, Phaeophyceae).石莼亚组硅质种(网地藻目,褐藻纲)的物种界定与系统地理学分析
J Phycol. 2017 Feb;53(1):17-31. doi: 10.1111/jpy.12452. Epub 2016 Aug 24.
3
Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae).微阵列估计属 Ectocarpus(褐藻纲)中基因组种间变异性。
BMC Mol Biol. 2011 Jan 13;12:2. doi: 10.1186/1471-2199-12-2.
4
A sequence-tagged genetic map for the brown alga Ectocarpus siliculosus provides large-scale assembly of the genome sequence.一个序列标记的褐藻(Ectocarpus siliculosus)遗传图谱为基因组序列的大规模组装提供了基础。
New Phytol. 2010 Oct;188(1):42-51. doi: 10.1111/j.1469-8137.2010.03273.x. Epub 2010 Apr 28.
5
Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids.两种褐藻——矽藻(Ectocarpus siliculosus)和墨角藻(Fucus vesiculosus)的质体基因组:对红藻衍生质体进化的进一步见解
BMC Evol Biol. 2009 Oct 16;9:253. doi: 10.1186/1471-2148-9-253.
6
Plastid Genome of Dictyopteris divaricata (Dictyotales, Phaeophyceae): Understanding the Evolution of Plastid Genomes in Brown Algae.宽肋凤尾蕨(Dictyotales,Phaeophyceae)的质体基因组:探讨棕色海藻质体基因组进化。
Mar Biotechnol (NY). 2017 Dec;19(6):627-637. doi: 10.1007/s10126-017-9781-5. Epub 2017 Nov 21.
7
Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus.对模式褐藻(Ectocarpus)基因组进行重新注释、改进大规模组装并建立非编码基因座目录。
New Phytol. 2017 Apr;214(1):219-232. doi: 10.1111/nph.14321. Epub 2016 Nov 21.
8
The Ectocarpus genome sequence: insights into brown algal biology and the evolutionary diversity of the eukaryotes.褐藻基因组序列:对褐藻生物学及真核生物进化多样性的洞察
New Phytol. 2010 Oct;188(1):1-4. doi: 10.1111/j.1469-8137.2010.03454.x.
9
Unusual Patterns of Mitochondrial Inheritance in the Brown Alga Ectocarpus.褐藻(Ectocarpus)中线粒体遗传的异常模式。
Mol Biol Evol. 2019 Dec 1;36(12):2778-2789. doi: 10.1093/molbev/msz186.
10
Complete mitochondrial genome of the brown alga Scytosiphon lomentaria (Scytosiphonaceae, Phaeophyceae).褐藻绳藻(绳藻科,褐藻纲)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):1494-6. doi: 10.3109/19401736.2014.953108. Epub 2014 Sep 4.

引用本文的文献

1
Microbiota Influences Morphology and Reproduction of the Brown Alga Ectocarpus sp.微生物群影响褐藻绳藻的形态和繁殖
Front Microbiol. 2016 Feb 24;7:197. doi: 10.3389/fmicb.2016.00197. eCollection 2016.
2
Localization of causal locus in the genome of the brown macroalga Ectocarpus: NGS-based mapping and positional cloning approaches.褐藻外果藻基因组中因果基因座的定位:基于二代测序的定位和图位克隆方法
Front Plant Sci. 2015 Feb 19;6:68. doi: 10.3389/fpls.2015.00068. eCollection 2015.
3
Uncovering the genetic basis for early isogamete differentiation: a case study of Ectocarpus siliculosus.
揭示早期配子分化的遗传基础:以泡叶藻为例的研究。
BMC Genomics. 2013 Dec 21;14:909. doi: 10.1186/1471-2164-14-909.
4
OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus.涡虫是褐藻(Ectocarpus)配子体到孢子体生活周期转换的主要调控因子。
Proc Natl Acad Sci U S A. 2011 Jul 12;108(28):11518-23. doi: 10.1073/pnas.1102274108. Epub 2011 Jun 27.
5
Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae).微阵列估计属 Ectocarpus(褐藻纲)中基因组种间变异性。
BMC Mol Biol. 2011 Jan 13;12:2. doi: 10.1186/1471-2199-12-2.