Institute of Genomics and Integrative Biology (Council of Scientific and Industrial Research), Delhi, India.
Zebrafish. 2010 Jun;7(2):179-80. doi: 10.1089/zeb.2009.0624.
The advancements in genomics technologies and the amenability to large-scale computational analysis have contributed immensely to the understanding of the zebrafish genome, its organization, and its functional correlates. Translating genomics information into biological meaning would require integration and amenability of data and tools. FishMap is a community resource for genomic datasets on zebrafish created with a vision to provide relevant and readily available information to zebrafish researchers. The present update of FishMap has kept up with the availability of the latest zebrafish genome assembly (Zv8). In this update, particular emphasis has been given to noncoding RNAs and noncoding RNA-mediated regulation in addition to genomic regulatory motifs, which are emerging areas of vertebrate biology. FishMap Zv8 update also features a sequence mapping and analysis server. Consistent with its commitment to make the information freely available to the community, FishMap features options to share data between compatible resources in addition to making it amenable to programmatic access. FishMap Zv8 update is available at http://fishmap2.igib.res.in.
基因组学技术的进步和大规模计算分析的可行性极大地促进了对斑马鱼基因组、其组织和功能相关性的理解。将基因组学信息转化为生物学意义需要数据和工具的整合和可行性。FishMap 是一个关于斑马鱼基因组数据集的社区资源,其创建愿景是为斑马鱼研究人员提供相关且易于获取的信息。FishMap 的本次更新紧跟最新的斑马鱼基因组组装 (Zv8) 的可用性。在本次更新中,除了基因组调控基序外,还特别强调了非编码 RNA 和非编码 RNA 介导的调控,这是脊椎动物生物学的新兴领域。FishMap Zv8 更新还具有序列映射和分析服务器。FishMap 致力于将信息免费提供给社区,因此它具有在兼容资源之间共享数据的选项,并使其易于进行编程访问。FishMap Zv8 更新可在 http://fishmap2.igib.res.in 获得。