Center for Medical Genetics, Ghent University Hospital Ghent, Belgium ; Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology Sylhet, Bangladesh.
Front Genet. 2013 May 8;4:74. doi: 10.3389/fgene.2013.00074. eCollection 2013.
Zebrafish (ZF, Danio rerio) has emerged as an important and popular model species to study different human diseases. Key regulators of skeletal development and calcium metabolism are highly conserved between mammals and ZF. The corresponding orthologs share significant sequence similarities and an overlap in expression patterns when compared to mammals, making ZF a potential model for the study of mineralization-related disorders and soft tissue mineralization. To characterize the function of early mineralization-related genes in ZF, these genes can be knocked down by injecting morpholinos into early stage embryos. Validation of the morpholino needs to be performed and the concern of aspecific effects can be addressed by applying one or more independent techniques to knock down the gene of interest. Post-injection assessment of early mineralization defects can be done using general light microscopy, calcein staining, Alizarin red staining, Alizarin red-Alcian blue double staining, and by the use of transgenic lines. Examination of general molecular defects can be done by performing protein and gene expression analysis, and more specific processes can be explored by investigating ectopic mineralization-related mechanisms such as apoptosis and mitochondrial dysfunction. In this paper, we will discuss all details about the aforementioned techniques; shared knowledge will be very useful for the future investigation of ZF models for ectopic mineralization disorders and to understand the underlying pathways involved in soft tissue calcification.
斑马鱼(ZF,Danio rerio)已成为研究人类不同疾病的重要且流行的模式生物。骨骼发育和钙代谢的关键调节因子在哺乳动物和 ZF 之间高度保守。与哺乳动物相比,相应的同源基因在序列上具有显著的相似性,并且在表达模式上存在重叠,这使得 ZF 成为研究矿化相关疾病和软组织矿化的潜在模型。为了研究 ZF 中早期矿化相关基因的功能,可以通过向早期胚胎注射形态发生素来敲低这些基因。需要对形态发生素进行验证,并且可以通过应用一种或多种独立的技术来敲低感兴趣的基因,以解决非特异性效应的问题。可以使用普通显微镜、钙黄绿素染色、茜素红染色、茜素红-阿尔新蓝双重染色以及转基因系来评估早期矿化缺陷。可以通过进行蛋白质和基因表达分析来检查一般的分子缺陷,并且可以通过研究异位矿化相关机制(如细胞凋亡和线粒体功能障碍)来探索更具体的过程。在本文中,我们将讨论上述所有技术的详细信息;共享的知识对于未来研究 ZF 模型的异位矿化疾病以及了解软组织钙化所涉及的潜在途径将非常有用。