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遗传毒性的计算预测。

The computational prediction of genotoxicity.

机构信息

Pfizer, Inc., Compound Safety Prediction, Eastern Point Road, Groton, CT 06340, USA.

出版信息

Expert Opin Drug Metab Toxicol. 2010 Jul;6(7):797-807. doi: 10.1517/17425255.2010.495118.

DOI:10.1517/17425255.2010.495118
PMID:20528613
Abstract

IMPORTANCE OF THE FIELD

The computational prediction of genotoxicity is important to the early identification of those chemical entities that have the potential to cause carcinogenicity in humans.

AREAS COVERED IN THIS REVIEW

The review discusses key scientific developments in the prediction of Ames mutagenicity and in vitro chromosome damage over the past 4 - 5 years. The performance and limitations of computational approaches are discussed in relation to published and internal validation exercises. Their application to the modern drug discovery paradigm is also discussed.

WHAT THE READER WILL GAIN

Key highlights of a review of the recent scientific literature for the prediction of Ames mutagenicity and chromosome damage and an appreciation of the factors that limit the predictive performance of in silico systems.

TAKE HOME MESSAGE

Current in silico systems perform well in the mutagenicity prediction of the publicly-derived data on which they are based, but their performance outside the applicability domain is considerably lower. We conclude that it is the lack of mechanistic structure-activity relationships and limited access to high quality proprietary data which are holding back computational genotoxicity from reaching higher predictive levels.

摘要

重要性的领域

计算预测的遗传毒性是很重要的,早期识别的那些化学实体,有可能导致致癌性在人类。

涵盖领域

本综述讨论了关键的科学发展预测的 Ames 致突变性和体外染色体损伤在过去的 4 - 5 年。性能和局限性的计算方法进行了讨论,涉及到已发表的和内部验证练习。他们的应用程序,以现代药物发现范例也进行了讨论。

读者将获得

主要亮点的审查最近的科学文献预测的 Ames 致突变性和染色体损伤和欣赏的因素,限制了预测性能的计算机系统。

带回家的消息

目前的计算机系统在预测的致突变性方面表现良好公开的基础上的数据,但是他们的表现之外的适用性域是相当低。我们得出的结论是,缺乏机械结构-活性关系和有限的访问高质量的专有数据,阻碍了计算遗传毒性达到更高的预测水平。

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Expert Opin Drug Metab Toxicol. 2010 Jul;6(7):797-807. doi: 10.1517/17425255.2010.495118.
2
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Chem Res Toxicol. 2021 Feb 15;34(2):179-188. doi: 10.1021/acs.chemrestox.0c00113. Epub 2020 Aug 7.
2
Integrated in silico approaches for the prediction of Ames test mutagenicity.基于计算的方法综合预测 Ames 试验致突变性。
J Comput Aided Mol Des. 2012 Sep;26(9):1017-33. doi: 10.1007/s10822-012-9595-5. Epub 2012 Aug 24.
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Inroads to predict in vivo toxicology-an introduction to the eTOX Project.预测体内毒理学的进展——eTOX项目介绍
Int J Mol Sci. 2012;13(3):3820-3846. doi: 10.3390/ijms13033820. Epub 2012 Mar 21.
4
An investigation into pharmaceutically relevant mutagenicity data and the influence on Ames predictive potential.对与药物相关的致突变性数据的调查以及对 Ames 预测潜力的影响。
J Cheminform. 2011 Nov 22;3:51. doi: 10.1186/1758-2946-3-51.
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In silico toxicology models and databases as FDA Critical Path Initiative toolkits.计算机毒理学模型和数据库作为 FDA 关键路径倡议工具包。
Hum Genomics. 2011 Mar;5(3):200-7. doi: 10.1186/1479-7364-5-3-200.