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使用适应/活跃状态下的黄素光受体对蓝光的快速光循环进行QM/MM 研究。

A QM/MM study on the fast photocycle of blue light using flavin photoreceptors in their light-adapted/active form.

机构信息

Institute of Physical and Theoretical Chemistry, University of Regensburg, Universitätsstrasse 31, D-93040 Regensburg, Germany.

出版信息

Phys Chem Chem Phys. 2010 Aug 21;12(31):8840-6. doi: 10.1039/b925908b. Epub 2010 Jun 8.

Abstract

Based on QM/MM calculations using a combination of time-dependent Hartree-Fock and coupled cluster response theory a mechanism is proposed for the photocycle of blue light using flavin (BLUF) domains in the signaling/light adapted conformation. In analogy to the dark-adapted form, a charge transfer state drives proton transfer from the highly conserved tyrosine residue to the flavin chromophore. The latter step is mediated by the adjacent glutamine residue, which, in the light adapted conformation, exists as its imidic tautomer. However, before the proton transfer is even halfway completed, a conical intersection seam between the charge transfer and ground state is reached. Two channels for the decay back to the initial light-adapted conformation are open, a rapid one leading directly through the funnel of the conical intersection, bypassing the formation of the biradical intermediate, and a slower one via the biradical intermediate. The mechanism as proposed here: (i) explains the very rapid photocycle; and (ii) confirms the concept of photoirreversibility, both of which have been experimentally observed for BLUF domains in their light-adapted conformations.

摘要

基于使用含时 Hartree-Fock 和耦合簇响应理论的 QM/MM 计算,提出了在信号/光适应构象的黄素(BLUF)结构域中蓝光光循环的机制。类似于暗适应形式,电荷转移状态驱动从高度保守的酪氨酸残基向黄素发色团的质子转移。后一步由相邻的谷氨酰胺残基介导,在光适应构象中,其存在亚氨互变异构体。然而,在质子转移甚至完成一半之前,就达到了电荷转移和基态之间的锥形交叉 seam。有两条通道可以回到初始的光适应构象,一条快速通道直接通过锥形交叉的漏斗,绕过双自由基中间体的形成,另一条较慢的通道通过双自由基中间体。所提出的机制:(i)解释了非常快速的光循环;(ii)证实了光不可逆性的概念,这两者在 BLUF 结构域的光适应构象中都已被实验观察到。

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