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基于 PER 和 TIM 二聚化和蛋白水解的昼夜节律简单模型。

A simple model of circadian rhythms based on dimerization and proteolysis of PER and TIM.

机构信息

Department of Biology, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA.

出版信息

Biophys J. 1999 Nov;77(5):2411-7. doi: 10.1016/S0006-3495(99)77078-5. Epub 2008 Nov 21.

DOI:10.1016/S0006-3495(99)77078-5
PMID:20540926
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1300518/
Abstract

Many organisms display rhythms of physiology and behavior that are entrained to the 24-h cycle of light and darkness prevailing on Earth. Under constant conditions of illumination and temperature, these internal biological rhythms persist with a period close to 1 day ("circadian"), but it is usually not exactly 24h. Recent discoveries have uncovered stunning similarities among the molecular circuitries of circadian clocks in mice, fruit flies, and bread molds. A consensus picture is coming into focus around two proteins (called PER and TIM in fruit flies), which dimerize and then inhibit transcription of their own genes. Although this picture seems to confirm a venerable model of circadian rhythms based on time-delayed negative feedback, we suggest that just as crucial to the circadian oscillator is a positive feedback loop based on stabilization of PER upon dimerization. These ideas can be expressed in simple mathematical form (phase plane portraits), and the model accounts naturally for several hallmarks of circadian rhythms, including temperature compensation and the per(L) mutant phenotype. In addition, the model suggests how an endogenous circadian oscillator could have evolved from a more primitive, light-activated switch.

摘要

许多生物体表现出生理和行为的节律,这些节律与地球上普遍存在的 24 小时光暗循环同步。在恒定的光照和温度条件下,这些内部生物节律以接近 1 天的周期(“昼夜节律”)持续,但通常不是恰好 24 小时。最近的发现揭示了小鼠、果蝇和面包霉菌昼夜节律钟的分子电路之间惊人的相似性。一个共识的画面正在围绕两种蛋白质(在果蝇中称为 PER 和 TIM)聚焦,这两种蛋白质二聚化,然后抑制自身基因的转录。尽管这个画面似乎证实了基于时间延迟负反馈的古老的昼夜节律模型,但我们认为,对于昼夜节律振荡器来说,同样至关重要的是基于 PER 二聚化稳定的正反馈环。这些想法可以用简单的数学形式(相平面图)来表示,该模型自然解释了昼夜节律的几个特征,包括温度补偿和 per(L) 突变表型。此外,该模型还表明,内源性昼夜节律振荡器如何从更原始的、光激活的开关进化而来。

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本文引用的文献

1
Possibilities of phase-control, demonstrated by an electronic model.通过一个电子模型展示的相位控制可能性。
Cold Spring Harb Symp Quant Biol. 1960;25:197-206. doi: 10.1101/sqb.1960.025.01.018.
2
Shock excited systems as models for biological rhythms.作为生物节律模型的休克激发系统。
Cold Spring Harb Symp Quant Biol. 1960;25:211-6. doi: 10.1101/sqb.1960.025.01.020.
3
TIMELESS-dependent positive and negative autoregulation in the Drosophila circadian clock.果蝇生物钟中依赖TIMELESS的正负自动调节。
EMBO J. 1999 Feb 1;18(3):675-86. doi: 10.1093/emboj/18.3.675.
4
A mathematical model for the intracellular circadian rhythm generator.一种用于细胞内昼夜节律发生器的数学模型。
J Neurosci. 1999 Jan 1;19(1):40-7. doi: 10.1523/JNEUROSCI.19-01-00040.1999.
5
Circadian rhythms: molecular basis of the clock.昼夜节律:生物钟的分子基础。
Curr Opin Genet Dev. 1998 Oct;8(5):595-602. doi: 10.1016/s0959-437x(98)80017-8.
6
Circadian regulation of a Drosophila homolog of the mammalian Clock gene: PER and TIM function as positive regulators.果蝇中哺乳动物生物钟基因同源物的昼夜节律调控:PER和TIM作为正向调节因子发挥作用。
Mol Cell Biol. 1998 Oct;18(10):6142-51. doi: 10.1128/MCB.18.10.6142.
7
The Drosophila clock gene double-time encodes a protein closely related to human casein kinase Iepsilon.果蝇生物钟基因doubletime编码一种与人类酪蛋白激酶Iε密切相关的蛋白质。
Cell. 1998 Jul 10;94(1):97-107. doi: 10.1016/s0092-8674(00)81225-8.
8
double-time is a novel Drosophila clock gene that regulates PERIOD protein accumulation.双时基因是一种新型果蝇时钟基因,可调节周期蛋白的积累。
Cell. 1998 Jul 10;94(1):83-95. doi: 10.1016/s0092-8674(00)81224-6.
9
CYCLE is a second bHLH-PAS clock protein essential for circadian rhythmicity and transcription of Drosophila period and timeless.CYCLE是一种第二个bHLH-PAS时钟蛋白,对果蝇周期蛋白和无时间蛋白的昼夜节律性和转录至关重要。
Cell. 1998 May 29;93(5):805-14. doi: 10.1016/s0092-8674(00)81441-5.
10
A mutant Drosophila homolog of mammalian Clock disrupts circadian rhythms and transcription of period and timeless.哺乳动物生物钟基因Clock的果蝇同源突变体扰乱昼夜节律以及周期基因(period)和无时间基因(timeless)的转录。
Cell. 1998 May 29;93(5):791-804. doi: 10.1016/s0092-8674(00)81440-3.