Bioenergy Research Unit, National Center for Agricultural Utilization Research, USDA Agricultural Research Service, 1815 N. University St., Peoria, IL 61604, USA.
Appl Biochem Biotechnol. 2010 Dec;162(8):2197-213. doi: 10.1007/s12010-010-8994-0. Epub 2010 Jun 13.
Catalytic properties of two glucoamylases, AmyC and AmyD, without starch binding domains from Rhizopus oryzae strain 99-880 are determined using heterologously expressed enzyme purified to homogeneity. AmyC and AmyD demonstrate pH optima of 5.5 and 6.0, respectively, nearly one unit higher than the Rhizopus AmyA glucoamylase enzyme. Optimal initial activities are at 60 and 50 °C for AmyC and AmyD, respectively. Inactivation of both enzymes occurs at 50 °C following 30 min pre-incubation. The two enzymes demonstrate substantially slower catalytic rates toward soluble starch relative to AmyA. AmyC has similar k(cat) and K(m) for oligosaccharides to other Rhizopus and Aspergillus glucoamylases; however, the enzyme has a 2-fold lower K(m) (maltose) . AmyD has a 3-fold higher K(m) and lower k(cat) for maltooligosaccharides than AmyC and other glucoamylases. AmyC (but not AmyD) exhibits substrate inhibition. K(i) for substrate inhibition decreases with increasing length of the oligosaccharides. Data from pre-steady-state binding of AmyC to maltose and maltotriose and pre-steady-state to steady-state catalytic turnover experiments of AmyC acting on maltotriose were used to interrogate models of substrate inhibition. In the preferred model, AmyC accumulates an enzyme-maltose-maltotriose dead-end complex in the steady state.
米曲霉 99-880 来源的两种无淀粉结合结构域的葡糖淀粉酶 AmyC 和 AmyD 的催化特性是通过异源表达并纯化为均相的酶来确定的。AmyC 和 AmyD 的 pH 最适值分别为 5.5 和 6.0,比米曲霉 AmyA 葡糖淀粉酶高近 1 个单位。AmyC 和 AmyD 的最佳初始活性分别在 60 和 50°C。在 50°C 预孵育 30 分钟后,两种酶均失活。与 AmyA 相比,这两种酶对可溶性淀粉的催化速率明显较慢。AmyC 对寡糖的 k(cat)和 K(m)与其他米曲霉和 Aspergillus 葡糖淀粉酶相似;然而,该酶的 K(m)(麦芽糖)低 2 倍。AmyD 对麦芽寡糖的 K(m)较高,k(cat)较低,低于 AmyC 和其他葡糖淀粉酶。AmyC(而非 AmyD)表现出底物抑制。底物抑制的 K(i)随寡糖长度的增加而降低。AmyC 与麦芽糖和麦芽三糖的预稳态结合以及 AmyC 作用于麦芽三糖的预稳态到稳态催化周转实验的数据用于探究底物抑制的模型。在首选模型中,AmyC 在稳态下积累酶-麦芽糖-麦芽三糖的无活性末端复合物。