Department of Computer Science and Numerical Analysis, University of Córdoba, Spain.
Int J Food Microbiol. 2010 Jul 15;141(3):203-12. doi: 10.1016/j.ijfoodmicro.2010.05.013. Epub 2010 May 27.
Boundary models have been recognized as useful tools to predict the ability of microorganisms to grow at limiting conditions. However, at these conditions, microbial behaviour can vary, being difficult to distinguish between growth or no growth. In this paper, the data from the study of Valero et al. [Valero, A., Pérez-Rodríguez, F., Carrasco, E., Fuentes-Alventosa, J.M., García-Gimeno, R.M., Zurera, G., 2009. Modelling the growth boundaries of Staphylococcus aureus: Effect of temperature, pH and water activity. International Journal of Food Microbiology 133 (1-2), 186-194] belonging to growth/no growth conditions of Staphylococcus aureus against temperature, pH and a(w) were divided into three categorical classes: growth (G), growth transition (GT) and no growth (NG). Subsequently, they were modelled by using a Radial Basis Function Neural Network (RBFNN) in order to create a multi-classification model that was able to predict the probability of belonging at one of the three mentioned classes. The model was developed through an over sampling procedure using a memetic algorithm (MA) in order to balance in part the size of the classes and to improve the accuracy of the classifier. The multi-classification model, named Smote Memetic Radial Basis Function (SMRBF) provided a quite good adjustment to data observed, being able to correctly classify the 86.30% of training data and the 82.26% of generalization data for the three observed classes in the best model. Besides, the high number of replicates per condition tested (n=30) produced a smooth transition between growth and no growth. At the most stringent conditions, the probability of belonging to class GT was higher, thus justifying the inclusion of the class in the new model. The SMRBF model presented in this study can be used to better define microbial growth/no growth interface and the variability associated to these conditions so as to apply this knowledge to a food safety in a decision-making process.
边界模型已被认为是预测微生物在限制条件下生长能力的有用工具。然而,在这些条件下,微生物的行为可能会发生变化,难以区分生长或不生长。在本文中,研究人员将 Valero 等人的研究数据[Valero, A., Pérez-Rodríguez, F., Carrasco, E., Fuentes-Alventosa, J.M., García-Gimeno, R.M., Zurera, G., 2009. 金黄色葡萄球菌生长边界模型:温度、pH 值和水分活度的影响。国际食品微生物学杂志 133 (1-2), 186-194]划分为三个类别:生长 (G)、生长过渡 (GT) 和不生长 (NG),这些数据属于金黄色葡萄球菌的生长/不生长条件与温度、pH 值和 a(w) 的关系。随后,使用径向基函数神经网络 (RBFNN) 对其进行建模,以创建一个能够预测属于上述三个类别之一的概率的多分类模型。该模型是通过使用遗传算法 (MA) 的过采样过程开发的,部分目的是平衡类别的大小并提高分类器的准确性。该多分类模型名为 Smote 遗传算法 Radial Basis Function (SMRBF),对所观察到的数据有较好的调整,能够正确分类训练数据的 86.30%和最佳模型中 3 个观测类别的 82.26%的泛化数据。此外,每个条件测试的重复次数较多(n=30),在生长和不生长之间产生了平稳过渡。在最严格的条件下,属于 GT 类的概率更高,因此新模型中包含该类是合理的。本研究中提出的 SMRBF 模型可用于更好地定义微生物生长/不生长界面及其与这些条件相关的变异性,以便将这些知识应用于食品安全决策过程中。