Vandenameele Julie, Matagne André, Damblon Christian
Laboratoire d'Enzymologie et Repliement des protéines, Centre d'Ingénierie des Protéines, Institut de Chimie B6, Université de Liège, 4000, Liège (Sart-Tilman), Belgium.
Biomol NMR Assign. 2010 Oct;4(2):195-7. doi: 10.1007/s12104-010-9241-x. Epub 2010 Jun 17.
Class A β-lactamases (260-280 amino acids; M ( r ) ~ 29,000) are among the largest proteins studied in term of their folding properties. They are composed of two structural domains: an all-α domain formed by five to eight helices and an α/β domain consisting of a five-stranded antiparallel β-sheet covered by three to four α-helices. The α domain (~150 residues) is made up of the central part of the polypeptide chain whereas the α/β domain (111-135 residues) is constituted by the N- and C-termini of the protein. Our goal is to determine in which order the different secondary structure elements are formed during the folding of BS3. With this aim, we will use pulse-labelling hydrogen/deuterium exchange experiments, in combination with 2D-NMR measurements, to monitor the time-course of formation and stabilization of secondary structure elements. Here we report the backbone resonance assignments as the requirement for further hydrogen/deuterium exchange studies.
A类β-内酰胺酶(260 - 280个氨基酸;分子量约为29,000)是就其折叠特性而言所研究的最大蛋白质之一。它们由两个结构域组成:一个由五到八个螺旋形成的全α结构域和一个由五股反平行β折叠片层组成、被三到四个α螺旋覆盖的α/β结构域。α结构域(约150个残基)由多肽链的中央部分组成,而α/β结构域(111 - 135个残基)由蛋白质的N端和C端构成。我们的目标是确定在BS3折叠过程中不同二级结构元件按何种顺序形成。出于这个目的,我们将使用脉冲标记氢/氘交换实验,并结合二维核磁共振测量,来监测二级结构元件形成和稳定的时间进程。在此我们报告主链共振归属,这是进一步进行氢/氘交换研究的必要条件。