Suppr超能文献

人工构建的TEM-1/PSE-4 A类β-内酰胺酶嵌合体及其去卷积突变体的15N、13C和1H主链共振归属

15N, 13C and 1H backbone resonance assignments of an artificially engineered TEM-1/PSE-4 class A β-lactamase chimera and its deconvoluted mutant.

作者信息

Gobeil Sophie M C, Gagné Donald, Doucet Nicolas, Pelletier Joelle N

机构信息

Department of Biochemistry, Université de Montréal, Montréal, QC, Canada.

PROTEO, The Québec Network for Research on Protein Function, Engineering and Applications, Québec, QC, Canada.

出版信息

Biomol NMR Assign. 2016 Apr;10(1):93-9. doi: 10.1007/s12104-015-9645-8. Epub 2015 Sep 19.

Abstract

The widespread use of β-lactam antibiotics has given rise to a dramatic increase in clinically-relevant β-lactamases. Understanding the structure/function relation in these variants is essential to better address the ever-growing incidence of antibiotic resistance. We previously reported the backbone resonance assignments of a chimeric protein constituted of segments of the class A β-lactamases TEM-1 and PSE-4 (Morin et al. in Biomol NMR Assign 4:127-130, 2010. doi: 10.1007/s12104-010-9227-8 ). That chimera, cTEM17m, held 17 amino acid substitutions relative to TEM-1 β-lactamase, resulting in a well-folded and fully functional protein with increased dynamics. Here we report the (1)H, (13)C and (15)N backbone resonance assignments of chimera cTEM-19m, which includes 19 substitutions and exhibits increased active-site perturbation, as well as one of its deconvoluted variants, as the first step in the analysis of their dynamic behaviours.

摘要

β-内酰胺抗生素的广泛使用导致临床上相关的β-内酰胺酶急剧增加。了解这些变体中的结构/功能关系对于更好地应对日益增长的抗生素耐药性发生率至关重要。我们之前报道了一种由A类β-内酰胺酶TEM-1和PSE-4的片段组成的嵌合蛋白的主链共振归属(Morin等人,《生物分子核磁共振归属》,2010年,第4卷,第127 - 130页。doi: 10.1007/s12104-010-9227-8)。该嵌合体cTEM17m相对于TEM-1β-内酰胺酶有17个氨基酸替换,产生了一种折叠良好且功能完全的蛋白,其动力学增加。在此,我们报告嵌合体cTEM-19m的(1)H、(13)C和(15)N主链共振归属,该嵌合体包含19个替换且表现出增加的活性位点扰动,以及其去卷积变体之一,作为分析它们动态行为的第一步。

相似文献

2
Backbone resonance assignments of an artificially engineered TEM-1/PSE-4 Class A β-lactamase chimera.
Biomol NMR Assign. 2010 Oct;4(2):127-30. doi: 10.1007/s12104-010-9227-8. Epub 2010 Apr 10.
5
1H, 13C and 15N backbone resonance assignments for the BS3 class A β-lactamase from Bacillus licheniformis.
Biomol NMR Assign. 2010 Oct;4(2):195-7. doi: 10.1007/s12104-010-9241-x. Epub 2010 Jun 17.
6
1H, 13C and 15N backbone resonance assignments for TEM-1, a 28.9 kDa beta-lactamase from E. coli.
J Biomol NMR. 2004 Jul;29(3):433-4. doi: 10.1023/B:JNMR.0000032503.96942.68.
7
Sequence specific 1H, 13C and 15N backbone resonance assignments of UVI31+ from Chlamydomonas reinhardtii.
Biomol NMR Assign. 2010 Oct;4(2):171-4. doi: 10.1007/s12104-010-9239-4. Epub 2010 Jun 5.
8
H, C, and N backbone resonance assignments for KPC-2, a class A serine-β-lactamase.
Biomol NMR Assign. 2019 Apr;13(1):139-142. doi: 10.1007/s12104-018-9866-8. Epub 2018 Dec 14.
10

本文引用的文献

1
Maintenance of native-like protein dynamics may not be required for engineering functional proteins.
Chem Biol. 2014 Oct 23;21(10):1330-1340. doi: 10.1016/j.chembiol.2014.07.016. Epub 2014 Sep 4.
2
Evolution of drug resistance: insight on TEM β-lactamases structure and activity and β-lactam antibiotics.
Mini Rev Med Chem. 2014 Feb;14(2):111-22. doi: 10.2174/1389557514666140123145809.
3
4
NMR View: A computer program for the visualization and analysis of NMR data.
J Biomol NMR. 1994 Sep;4(5):603-14. doi: 10.1007/BF00404272.
5
Backbone resonance assignments of an artificially engineered TEM-1/PSE-4 Class A β-lactamase chimera.
Biomol NMR Assign. 2010 Oct;4(2):127-30. doi: 10.1007/s12104-010-9227-8. Epub 2010 Apr 10.
6
7
Structure-guided SCHEMA recombination of distantly related beta-lactamases.
Protein Eng Des Sel. 2006 Dec;19(12):563-70. doi: 10.1093/protein/gzl045. Epub 2006 Nov 6.
8
Backbone dynamics of TEM-1 determined by NMR: evidence for a highly ordered protein.
Biochemistry. 2006 Sep 26;45(38):11414-24. doi: 10.1021/bi060414q.
10
Protein production by auto-induction in high density shaking cultures.
Protein Expr Purif. 2005 May;41(1):207-34. doi: 10.1016/j.pep.2005.01.016.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验