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通过二维 NMR 光谱对完整的天然和合成肽中的 D-和 L-异缬氨酸进行构象分配。

Configurational assignment of D- and L-isovalines in intact, natural, and synthetic peptides by 2D-NMR spectroscopy.

机构信息

Institute of Biomolecular Chemistry, CNR, Padova Unit, Department of Chemical Sciences, University of Padova, I-35131 Padova, Italy.

出版信息

Chem Biodivers. 2010 Jun;7(6):1612-24. doi: 10.1002/cbdv.200900287.

Abstract

We investigated, by means of 2D-NMR, the naturally occurring and chemically synthesized 16-mer integramides A and B, which belong to a group of bioactive, fungal peptides (peptaibiotics), that are characterized by an abundance of Aib as well as D- and L-Iva residues. The chemical shifts of the C(alpha)-alkyl groups in the Iva enantiomers depend on the alpha-C-atom configuration and on the helical screw sense of the peptides, the latter determined by CD. In the full-length, right-handed helical integramides, as well as in the partial sequences exploited for their total chemical syntheses, the gamma-Me H-atoms of the Et side chain of the D-Iva residues located near the C-terminus are significantly more shielded (delta<0.90 ppm) than those of the L-Iva residues (delta>0.95 ppm). The opposite behavior is observed for the left-handed, synthetic, intermediate Z-Aib-L-Hyp-L-Iva(14)-D-Iva(15)-O(t)Bu. Here, the gamma-Me H-atoms of L-Iva(14) are more shielded (0.838 ppm) than those of D-Iva(15) (0.905 ppm). The chemical-shift difference between the diastereotopic beta-CH(2) H-atoms of the Iva side chains in the right-handed helical peptides is much larger for D-Iva than for L-Iva. For D-Iva(14/15), the values range from 0.38 to 0.63 ppm, whereas, for D-Iva(1), the value is in the range of 0.26-0.31 ppm. In each case, the difference is always larger for the d-Iva than for the l-Iva residues (which is always <or=0.19 ppm). Again, an opposite behavior is seen for the left-handed tetrapeptide. Overall, our method enables the nondestructive assignment of the configuration of each Iva residue in peptides of known helical screw sense.

摘要

我们通过 2D-NMR 研究了天然存在和化学合成的 16 肽 integramides A 和 B,它们属于一组生物活性的真菌肽(肽抗生素),其特征是富含 Aib 以及 D-和 L-Iva 残基。Iva 对映体的 C(alpha)-烷基的化学位移取决于 α-C-原子的构型和肽的螺旋螺旋方向,后者由 CD 确定。在全长的右手螺旋 integramides 中,以及在用于其全化学合成的部分序列中,位于 C 末端附近的 D-Iva 残基的 Et 侧链的γ-Me H 原子被显著屏蔽(δ<0.90 ppm)比 L-Iva 残基(δ>0.95 ppm)。对于左手、合成的中间 Z-Aib-L-Hyp-L-Iva(14)-D-Iva(15)-O(t)Bu,观察到相反的行为。在这里,L-Iva(14)的γ-Me H 原子被屏蔽(0.838 ppm)比 D-Iva(15)的更屏蔽(0.905 ppm)。在右手螺旋肽中,Iva 侧链的非对映异构β-CH(2)H 原子的化学位移差对于 D-Iva 比对于 L-Iva 大得多。对于 D-Iva(14/15),值范围为 0.38 至 0.63 ppm,而对于 D-Iva(1),值范围为 0.26 至 0.31 ppm。在每种情况下,d-Iva 的差异总是大于 l-Iva 残基(总是<0.19 ppm)。对于左手四肽,再次观察到相反的行为。总的来说,我们的方法能够在已知螺旋螺旋方向的肽中无损地分配每个 Iva 残基的构型。

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