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实时聚合酶链反应检测法在单纯疱疹病毒1型DNA检测中的应用

[Application of real-time PCR assay for investigating the presence of herpes simplex virus type 1 DNA].

作者信息

Midak-Siewirska Anna, Karabin Karolina, Chudzik Emilia, Dzieciatkowski Tomasz, Przybylski Maciej, Majewska Anna, Łuczak Mirosław, Młynarczyk Grazyna

机构信息

Katedra i Zakład Mikrobiologii Lekarskiej, Warszawski Uniwersytet Medyczny.

出版信息

Med Dosw Mikrobiol. 2010;62(1):85-92.

PMID:20564975
Abstract

Herpes simplex virus type 1 is a member of the Alphaherpesviridae subfamily, as it can infect both skin and nerves and develop latent infection within the dorsal root and trigeminal ganglia. Infection with this virus is common and causes a wide range of clinical syndromes. Although HSV-1 infect healthy children and adults, disease is more severe and extensive in the immunocompromised individuals. The goal of the study was development of real-time PCR assay for detection of herpes simplex virus type 1 DNA in clinical samples, using primers targeting a conserved region of the viral DNA glycoprotein G gene and a specific TaqMan hydrolyzing probe. The analytical sensitivity of assay was tested using serial dilutions of HSV-1 DNA in range between 10(0) and 10(-6) (4,35 x 10(5) - 4,00 x 10(1) copies/ml). Fifteen cell line isolates and twenty plasma samples taken from a group of adult recipients of allogeneic HSCT were tested for the presence of HSV-1 DNA in the LightCycler system. For comparison commercial quantitative HSV-1/2 LC PCR Kit (Artus/Qiagen) was used, according to the manufacturer's instructions. Both LightCycler assays, including in-house real-time PCR, detected HSV-1 DNA in 23 specimens. The conclusion is that developed TaqMan-based probe real-time PCR test is very reliable and valuable for detection of HSV-1 viremia in different kind of samples. The high level of sensitivity and accuracy provided by the LightCycler instrument is favorable for the use of this method in the detection of herpes simplex virus 1 DNA also in clinical specimens.

摘要

单纯疱疹病毒1型是α疱疹病毒亚科的成员,因为它既能感染皮肤和神经,又能在背根神经节和三叉神经节内形成潜伏感染。这种病毒感染很常见,会引发多种临床综合征。虽然HSV-1可感染健康儿童和成人,但在免疫功能低下的个体中,疾病会更严重且范围更广。该研究的目的是开发一种实时PCR检测方法,用于检测临床样本中的单纯疱疹病毒1型DNA,使用针对病毒DNA糖蛋白G基因保守区域的引物和一种特异性TaqMan水解探针。使用10(0)至10(-6)(4.35×10(5) - 4.00×10(1)拷贝/毫升)范围内的HSV-1 DNA系列稀释液测试该检测方法的分析灵敏度。对15株细胞系分离株和从一组异基因造血干细胞移植成年受者采集的20份血浆样本进行检测,以确定在LightCycler系统中是否存在HSV-1 DNA。为作比较,按照制造商说明使用商业定量HSV-1/2 LC PCR试剂盒(Artus/Qiagen)。两种LightCycler检测方法,包括内部实时PCR检测,均在23份标本中检测到HSV-1 DNA。结论是,所开发的基于TaqMan探针的实时PCR检测方法对于检测不同类型样本中的HSV-1病毒血症非常可靠且有价值。LightCycler仪器提供的高灵敏度和准确性有利于该方法在临床标本中检测单纯疱疹病毒1型DNA时的应用。

相似文献

1
[Application of real-time PCR assay for investigating the presence of herpes simplex virus type 1 DNA].实时聚合酶链反应检测法在单纯疱疹病毒1型DNA检测中的应用
Med Dosw Mikrobiol. 2010;62(1):85-92.
2
[Development of a novel real-time PCR method for detection of HSV types 1 and 2 DNA using HybProbe chemistry].[一种使用杂交探针化学法检测单纯疱疹病毒1型和2型DNA的新型实时聚合酶链反应方法的开发]
Med Dosw Mikrobiol. 2010;62(3):255-62.
3
[Real-time PCR as an efficient tool for investigating the presence of human herpesvirus 6 DNA].
Med Dosw Mikrobiol. 2008;60(3):259-65.
4
Detection and differentiation of herpes simplex virus types 1 and 2 by a duplex LightCycler PCR that incorporates an internal control PCR reaction.通过一种包含内部对照PCR反应的双重LightCycler PCR检测和区分1型和2型单纯疱疹病毒。
J Clin Virol. 2004 May;30(1):32-8. doi: 10.1016/j.jcv.2003.08.003.
5
[Application of real-time PCR and LightCycler system for investigating the presence of human herpesvirus 7 DNA].实时聚合酶链反应及LightCycler系统在检测人疱疹病毒7型DNA中的应用
Med Dosw Mikrobiol. 2009;61(1):93-8.
6
Simultaneous detection of herpes simplex virus types 1 and 2 by real-time PCR and Pyrosequencing.通过实时聚合酶链反应和焦磷酸测序法同时检测1型和2型单纯疱疹病毒
J Clin Virol. 2005 May;33(1):25-34. doi: 10.1016/j.jcv.2004.09.022.
7
Routine use of a highly automated and internally controlled real-time PCR assay for the diagnosis of herpes simplex and varicella-zoster virus infections.使用高度自动化且内部可控的实时聚合酶链反应检测法常规诊断单纯疱疹病毒和水痘带状疱疹病毒感染。
J Clin Virol. 2004 May;30(1):39-44. doi: 10.1016/j.jcv.2003.08.006.
8
Use of two real-time polymerase chain reactions (PCRs) to detect herpes simplex type 1 and 2-DNA after automated extraction of nucleic acid.在核酸自动提取后,使用两种实时聚合酶链反应(PCR)检测1型和2型单纯疱疹病毒DNA。
J Med Virol. 2004 Nov;74(3):459-62. doi: 10.1002/jmv.20198.
9
Automated detection of five human herpes virus DNAs by a set of LightCycler PCRs complemented with a single multiple internal control.通过一组LightCycler PCR并辅以单个多重内部对照自动检测五种人类疱疹病毒DNA。
J Clin Virol. 2004 Mar;29(3):171-8. doi: 10.1016/S1386-6532(03)00121-5.
10
[Investigation of herpes simplex virus (HSV) by three different methods in the clinical specimens of patients with suspected HSV infections].[采用三种不同方法对疑似单纯疱疹病毒(HSV)感染患者临床标本中的HSV进行检测]
Mikrobiyol Bul. 2010 Jan;44(1):47-56.

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Amentoflavone Inhibits HSV-1 and ACV-Resistant Strain Infection by Suppressing Viral Early Infection.阿魏酸抑制单纯疱疹病毒-1 和 ACV 耐药株感染,通过抑制病毒早期感染。
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