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通过电子圆二色性、旋光色散和振动圆二色性光谱以及密度泛函理论计算,确定双环[3.1.0]己烷衍生物的绝对构型。

Determination of the absolute configurations of bicyclo[3.1.0]hexane derivatives via electronic circular dichroism, optical rotation dispersion and vibrational circular dichroism spectroscopy and density functional theory calculations.

机构信息

Department of Chemistry and Alberta Ingenuity Centre for Carbohydrate Science, University of Alberta, Edmonton, AB, Canada T6G 2G2.

出版信息

Org Biomol Chem. 2010 Aug 21;8(16):3777-83. doi: 10.1039/c002655g. Epub 2010 Jun 22.

Abstract

The electronic circular dichroism (ECD), optical rotation dispersion (ORD), and vibrational circular dichroism (VCD) spectra of a pair of enantiomers, i.e. 3 and 4, of a bicyclo[3.1.0]hexane derivative have been measured in acetonitrile and acetonitrile-d(3), respectively. Extensive conformational searches at the B3LYP/6-311++G** level have been carried out for 3, which has four OH and one N(3) functional groups. For the bicyclo[3.1.0]hexane ring of 3, the boat-like conformers have been found to be much more stable than the chair-like conformers, while the number and the strength of the intramolecular hydrogen bonds have been identified as the dominant factors in the relative stability among the boat-like and among the chair-like conformers. DFT simulations of the ECD, ORD and VCD spectra have been performed for all low energy conformers at the B3LYP/6-311++G** and B3LYP/aug-cc-pVDZ level. Implicit continuum polarization model has been used to account for solvent effects in all these chiroptical measurements. Comparison of the DFT simulations with the experimental data shows that all three chiroptical properties yield the same absolute configuration assignment for . This work demonstrates that using multiple chiroptical spectroscopic methods in combination with DFT calculations allows one to determine absolute configurations with high confidence for chiral carbohydrates and their analogues, which possess a large number of rotatable bonds.

摘要

已分别在乙腈和乙腈-d3 中测量了一对桥环[3.1.0]己烷衍生物对映体 3 和 4 的电子圆二色性 (ECD)、旋光色散 (ORD) 和振动圆二色性 (VCD) 光谱。在 B3LYP/6-311++G** 水平上对具有四个 OH 和一个 N(3) 官能团的 3 进行了广泛的构象搜索。对于 3 的桥环[3.1.0]己烷环,已发现船型构象比椅型构象稳定得多,而分子内氢键的数量和强度被确定为船型和椅型构象之间相对稳定性的主要因素。已在 B3LYP/6-311++G** 和 B3LYP/aug-cc-pVDZ 水平上对所有低能量构象进行了 ECD、ORD 和 VCD 光谱的 DFT 模拟。在所有这些手性测量中,都使用隐式连续极化模型来考虑溶剂效应。DFT 模拟与实验数据的比较表明,所有三种手性性质都为 3 提供了相同的绝对构型分配。这项工作表明,使用多种手性光谱方法与 DFT 计算相结合,可以为具有大量旋转键的手性碳水化合物及其类似物确定具有高置信度的绝对构型。

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