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抗生素杆菌肽A的X射线结构。

X-Ray structure of the antibiotic bacitracin A.

作者信息

Pfeffer S, Höhne W, Branner S, Wilson K, Betzel C

机构信息

European Molecular Biology Laboratory, Hamburg, Germany.

出版信息

FEBS Lett. 1991 Jul 8;285(1):115-9. doi: 10.1016/0014-5793(91)80738-o.

DOI:10.1016/0014-5793(91)80738-o
PMID:2065774
Abstract

Bacitracins are a group of widely used peptide antibiotics. There has been interest in determining the three-dimensional structure of the bacitracins. However, solution studies indicate significant flexibility in their structure and to date native bacitracins have resisted attempts at crystallisation despite considerable efforts over a number of years by several groups. Here we report the first three-dimensional X-ray structure of a bacitracin, complexed to a subtilisin proteinase. X-Ray diffraction data were collected using synchrotron radiation in combination with the Image Plate Scanner system. The complex structure including two enzymes, two bacitracins, 220 water molecules and two Ca2+ ions was refined by restrained least-squares to a crystallographic R factor ( = sigma [[Fo-Fc]]/sigma [Fo]]) of 16.3% at 2.0 A.

摘要

杆菌肽是一类广泛使用的肽抗生素。人们一直对确定杆菌肽的三维结构感兴趣。然而,溶液研究表明其结构具有显著的灵活性,并且尽管多个研究小组多年来付出了相当大的努力,但迄今为止天然杆菌肽仍难以结晶。在此我们报告了首个与枯草杆菌蛋白酶复合的杆菌肽的三维X射线结构。使用同步辐射结合成像板扫描仪系统收集了X射线衍射数据。该复合结构包括两种酶、两个杆菌肽、220个水分子和两个Ca2+离子,通过约束最小二乘法精修至在2.0 Å分辨率下晶体学R因子(= sigma [[Fo-Fc]]/sigma [Fo])为16.3%。

相似文献

1
X-Ray structure of the antibiotic bacitracin A.抗生素杆菌肽A的X射线结构。
FEBS Lett. 1991 Jul 8;285(1):115-9. doi: 10.1016/0014-5793(91)80738-o.
2
Complex between the subtilisin from a mesophilic bacterium and the leech inhibitor eglin-C.嗜温细菌枯草杆菌蛋白酶与水蛭抑制剂水蛭素-C之间的复合物。
Acta Crystallogr B. 1991 Oct 1;47 ( Pt 5):707-30. doi: 10.1107/s0108768191004202.
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Crystal structure of subtilisin DY, a random mutant of subtilisin Carlsberg.枯草杆菌蛋白酶DY(枯草杆菌蛋白酶Carlsberg的随机突变体)的晶体结构。
Eur J Biochem. 1998 Oct 15;257(2):309-18. doi: 10.1046/j.1432-1327.1998.2570309.x.
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Three dimensional structure of the antibiotic bacitracin A complexed to two different subtilisin proteases: novel mode of enzyme inhibition.
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Proton NMR studies of Co(II) complexes of the peptide antibiotic bacitracin and analogues: insight into structure-activity relationship.肽抗生素杆菌肽及其类似物的钴(II)配合物的质子核磁共振研究:对构效关系的深入了解
Biochemistry. 2000 Apr 11;39(14):4037-45. doi: 10.1021/bi991997p.
6
The high-resolution X-ray crystal structure of the complex formed between subtilisin Carlsberg and eglin c, an elastase inhibitor from the leech Hirudo medicinalis. Structural analysis, subtilisin structure and interface geometry.枯草杆菌蛋白酶卡尔伯格变种与水蛭医用蛭的弹性蛋白酶抑制剂水蛭素c形成的复合物的高分辨率X射线晶体结构。结构分析、枯草杆菌蛋白酶结构及界面几何学。
Eur J Biochem. 1987 Aug 3;166(3):673-92. doi: 10.1111/j.1432-1033.1987.tb13566.x.
7
Structural comparison of two serine proteinase-protein inhibitor complexes: eglin-c-subtilisin Carlsberg and CI-2-subtilisin Novo.两种丝氨酸蛋白酶-蛋白质抑制剂复合物的结构比较:依格林-c-枯草杆菌蛋白酶卡尔伯格和CI-2-枯草杆菌蛋白酶诺沃
Biochemistry. 1988 Aug 23;27(17):6582-98.
8
1H NMR study on the conformation of bacitracin A in aqueous solution.
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9
The crystal structure of staphylococcal nuclease refined at 1.7 A resolution.葡萄球菌核酸酶的晶体结构在1.7埃分辨率下得到优化。
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Crystal and molecular structure of the inhibitor eglin from leeches in complex with subtilisin Carlsberg.水蛭中的抑制剂埃格林与卡尔伯格枯草杆菌蛋白酶复合物的晶体结构和分子结构。
FEBS Lett. 1985 Aug 19;188(1):55-8. doi: 10.1016/0014-5793(85)80873-5.

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