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本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Phaser crystallographic software.相位结晶学软件。
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
3
Human glyoxalase II contains an Fe(II)Zn(II) center but is active as a mononuclear Zn(II) enzyme.人乙醛酸酶II含有一个Fe(II)Zn(II)中心,但作为一种单核Zn(II)酶具有活性。
Biochemistry. 2009 Jun 16;48(23):5426-34. doi: 10.1021/bi9001375.
4
Structure of TTHA1623, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8.嗜热栖热菌HB8中一种新型金属β-内酰胺酶超家族蛋白TTHA1623的结构
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 May 1;65(Pt 5):455-9. doi: 10.1107/S174430910901361X. Epub 2009 Apr 24.
5
Architectural adaptation and protein expression patterns of Salmonella enterica serovar Enteritidis biofilms under laminar flow conditions.肠炎沙门氏菌肠炎血清型生物膜在层流条件下的结构适应性和蛋白质表达模式
Int J Food Microbiol. 2008 Mar 31;123(1-2):109-20. doi: 10.1016/j.ijfoodmicro.2007.12.021. Epub 2008 Jan 2.
6
Catalysis and structural properties of Leishmania infantum glyoxalase II: trypanothione specificity and phylogeny.婴儿利什曼原虫乙二醛酶II的催化和结构特性:锥虫硫醇特异性和系统发育
Biochemistry. 2008 Jan 8;47(1):195-204. doi: 10.1021/bi700989m. Epub 2007 Dec 6.
7
Ensemble refinement of protein crystal structures: validation and application.蛋白质晶体结构的联合精修:验证与应用
Structure. 2007 Sep;15(9):1040-52. doi: 10.1016/j.str.2007.06.019.
8
Biochemical and structural characterization of Salmonella typhimurium glyoxalase II: new insights into metal ion selectivity.鼠伤寒沙门氏菌乙二醛酶II的生化与结构表征:对金属离子选择性的新见解
Biochemistry. 2007 Oct 2;46(39):11069-79. doi: 10.1021/bi7007245. Epub 2007 Sep 1.
9
Metallo-beta-lactamases (classification, activity, genetic organization, structure, zinc coordination) and their superfamily.金属β-内酰胺酶(分类、活性、基因组织、结构、锌配位)及其超家族。
Biochem Pharmacol. 2007 Dec 15;74(12):1686-701. doi: 10.1016/j.bcp.2007.05.021. Epub 2007 Jun 2.
10
Competitive inhibitors of the CphA metallo-beta-lactamase from Aeromonas hydrophila.嗜水气单胞菌CphA金属β-内酰胺酶的竞争性抑制剂。
Antimicrob Agents Chemother. 2007 Jun;51(6):2136-42. doi: 10.1128/AAC.00866-06. Epub 2007 Feb 16.

鼠伤寒沙门氏菌 YcbL 的结构与功能表征:一种不寻常的 II 型乙二醛酶。

Structural and functional characterization of Salmonella enterica serovar Typhimurium YcbL: an unusual Type II glyoxalase.

机构信息

Division of Structural Biology, The Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.

出版信息

Protein Sci. 2010 Oct;19(10):1897-905. doi: 10.1002/pro.475.

DOI:10.1002/pro.475
PMID:20669241
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2998724/
Abstract

YcbL has been annotated as either a metallo-β-lactamase or glyoxalase II (GLX2), both members of the zinc metallohydrolase superfamily, that contains many enzymes with a diverse range of activities. Here, we report crystallographic and biochemical data for Salmonella enterica serovar Typhimurium YcbL that establishes it as GLX2, which differs in certain structural and functional properties compared with previously known examples. These features include the insertion of an α-helix after residue 87 in YcbL and truncation of the C-terminal domain, which leads to the loss of some recognition determinants for the glutathione substrate. Despite these changes, YcbL has robust GLX2 activity. A further difference is that the YcbL structure contains only a single bound metal ion rather than the dual site normally observed for GLX2s. Activity assays in the presence of various metal ions indicate an increase in activity above basal levels in the presence of manganous and ferrous ions. Thus, YcbL represents a novel member of the GLX2 family.

摘要

YcbL 被注释为金属-β-内酰胺酶或醛缩酶 II (GLX2),两者均属于锌金属水解酶超家族,其中包含许多具有多种活性的酶。在这里,我们报告了鼠伤寒沙门氏菌 YcbL 的晶体学和生物化学数据,将其确定为 GLX2,与以前已知的例子相比,它在某些结构和功能特性上有所不同。这些特征包括在残基 87 后插入一个α-螺旋和 C 端结构域的截断,这导致失去了一些对谷胱甘肽底物的识别决定因素。尽管有这些变化,YcbL 仍具有强大的 GLX2 活性。另一个不同之处在于,YcbL 结构中只含有一个结合的金属离子,而不是通常观察到的 GLX2 双位点。在存在各种金属离子的活性测定中,锰离子和亚铁离子的存在会使活性高于基础水平。因此,YcbL 代表 GLX2 家族的一个新成员。