Division of Structural Biology, The Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.
Protein Sci. 2010 Oct;19(10):1897-905. doi: 10.1002/pro.475.
YcbL has been annotated as either a metallo-β-lactamase or glyoxalase II (GLX2), both members of the zinc metallohydrolase superfamily, that contains many enzymes with a diverse range of activities. Here, we report crystallographic and biochemical data for Salmonella enterica serovar Typhimurium YcbL that establishes it as GLX2, which differs in certain structural and functional properties compared with previously known examples. These features include the insertion of an α-helix after residue 87 in YcbL and truncation of the C-terminal domain, which leads to the loss of some recognition determinants for the glutathione substrate. Despite these changes, YcbL has robust GLX2 activity. A further difference is that the YcbL structure contains only a single bound metal ion rather than the dual site normally observed for GLX2s. Activity assays in the presence of various metal ions indicate an increase in activity above basal levels in the presence of manganous and ferrous ions. Thus, YcbL represents a novel member of the GLX2 family.
YcbL 被注释为金属-β-内酰胺酶或醛缩酶 II (GLX2),两者均属于锌金属水解酶超家族,其中包含许多具有多种活性的酶。在这里,我们报告了鼠伤寒沙门氏菌 YcbL 的晶体学和生物化学数据,将其确定为 GLX2,与以前已知的例子相比,它在某些结构和功能特性上有所不同。这些特征包括在残基 87 后插入一个α-螺旋和 C 端结构域的截断,这导致失去了一些对谷胱甘肽底物的识别决定因素。尽管有这些变化,YcbL 仍具有强大的 GLX2 活性。另一个不同之处在于,YcbL 结构中只含有一个结合的金属离子,而不是通常观察到的 GLX2 双位点。在存在各种金属离子的活性测定中,锰离子和亚铁离子的存在会使活性高于基础水平。因此,YcbL 代表 GLX2 家族的一个新成员。