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真核翻译起始因子 3g(eIF3g)的 RNA 识别模体对于重新起始 GCN4 上终止后核糖体的扫描是必需的,并且与 eIF3i 一起刺激线性扫描。

The RNA recognition motif of eukaryotic translation initiation factor 3g (eIF3g) is required for resumption of scanning of posttermination ribosomes for reinitiation on GCN4 and together with eIF3i stimulates linear scanning.

机构信息

Laboratory of Regulation of Gene Expression, Institute of Microbiology AVCR, v.v.i., Videnska 1083, Prague, Czech Republic.

出版信息

Mol Cell Biol. 2010 Oct;30(19):4671-86. doi: 10.1128/MCB.00430-10. Epub 2010 Aug 2.

DOI:10.1128/MCB.00430-10
PMID:20679478
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2950517/
Abstract

Recent reports have begun unraveling the details of various roles of individual eukaryotic translation initiation factor 3 (eIF3) subunits in translation initiation. Here we describe functional characterization of two essential Saccharomyces cerevisiae eIF3 subunits, g/Tif35 and i/Tif34, previously suggested to be dispensable for formation of the 48S preinitiation complexes (PICs) in vitro. A triple-Ala substitution of conserved residues in the RRM of g/Tif35 (g/tif35-KLF) or a single-point mutation in the WD40 repeat 6 of i/Tif34 (i/tif34-Q258R) produces severe growth defects and decreases the rate of translation initiation in vivo without affecting the integrity of eIF3 and formation of the 43S PICs in vivo. Both mutations also diminish induction of GCN4 expression, which occurs upon starvation via reinitiation. Whereas g/tif35-KLF impedes resumption of scanning for downstream reinitiation by 40S ribosomes terminating at upstream open reading frame 1 (uORF1) in the GCN4 mRNA leader, i/tif34-Q258R prevents full GCN4 derepression by impairing the rate of scanning of posttermination 40S ribosomes moving downstream from uORF1. In addition, g/tif35-KLF reduces processivity of scanning through stable secondary structures, and g/Tif35 specifically interacts with Rps3 and Rps20 located near the ribosomal mRNA entry channel. Together these results implicate g/Tif35 and i/Tif34 in stimulation of linear scanning and, specifically in the case of g/Tif35, also in proper regulation of the GCN4 reinitiation mechanism.

摘要

最近的报告开始揭示各种真核翻译起始因子 3 (eIF3) 亚基在翻译起始中的作用细节。在这里,我们描述了两个必需的酿酒酵母 eIF3 亚基 g/Tif35 和 i/Tif34 的功能特征,先前的研究表明它们对于体外形成 48S 起始前复合物 (PIC) 是可有可无的。在 g/Tif35 的 RRM 中的保守残基上进行三重 Ala 取代(g/tif35-KLF)或在 i/Tif34 的 WD40 重复 6 中进行单点突变(i/tif34-Q258R),会导致严重的生长缺陷,并降低体内翻译起始的速率,而不影响 eIF3 的完整性和体内 43S PIC 的形成。这两种突变还会降低 GCN4 表达的诱导,这种诱导是在饥饿时通过重新起始发生的。虽然 g/tif35-KLF 会阻碍终止于 GCN4 mRNA 5' 非翻译区 1 (uORF1) 的 40S 核糖体对下游重新起始的扫描恢复,但 i/tif34-Q258R 会通过降低终止后 40S 核糖体从 uORF1 向下游移动的扫描速率来阻止 GCN4 完全去阻遏。此外,g/tif35-KLF 通过稳定二级结构降低扫描的连续性,并且 g/Tif35 特异性与位于核糖体 mRNA 入口通道附近的 Rps3 和 Rps20 相互作用。这些结果表明 g/Tif35 和 i/Tif34 参与了线性扫描的刺激,特别是在 g/Tif35 的情况下,也参与了 GCN4 重新起始机制的适当调节。

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本文引用的文献

1
The C-terminal region of eukaryotic translation initiation factor 3a (eIF3a) promotes mRNA recruitment, scanning, and, together with eIF3j and the eIF3b RNA recognition motif, selection of AUG start codons.真核翻译起始因子 3a(eIF3a)的 C 端区域促进了 mRNA 的募集、扫描,以及与 eIF3j 和 eIF3b RNA 识别基序一起,选择 AUG 起始密码子。
Mol Cell Biol. 2010 Sep;30(18):4415-34. doi: 10.1128/MCB.00280-10. Epub 2010 Jun 28.
2
The indispensable N-terminal half of eIF3j/HCR1 cooperates with its structurally conserved binding partner eIF3b/PRT1-RRM and with eIF1A in stringent AUG selection.eIF3j/HCR1 的不可或缺的 N 端半结构域与结构上保守的结合伙伴 eIF3b/PRT1-RRM 和 eIF1A 协同作用,在严格的 AUG 选择中发挥作用。
J Mol Biol. 2010 Mar 5;396(4):1097-116. doi: 10.1016/j.jmb.2009.12.047. Epub 2010 Jan 11.
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Comprehensive molecular structure of the eukaryotic ribosome.真核生物核糖体的综合分子结构。
Structure. 2009 Dec 9;17(12):1591-1604. doi: 10.1016/j.str.2009.09.015.
4
eIF3a cooperates with sequences 5' of uORF1 to promote resumption of scanning by post-termination ribosomes for reinitiation on GCN4 mRNA.真核起始因子3a(eIF3a)与上游开放阅读框1(uORF1)5'端的序列协同作用,以促进终止后核糖体重新开始扫描,从而在GCN4信使核糖核酸(mRNA)上重新起始翻译。
Genes Dev. 2008 Sep 1;22(17):2414-25. doi: 10.1101/gad.480508.
5
Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3.质谱分析揭示了真核生物翻译因子eIF3的模块性和完整的亚基相互作用图谱。
Proc Natl Acad Sci U S A. 2008 Nov 25;105(47):18139-44. doi: 10.1073/pnas.0801313105. Epub 2008 Jul 1.
6
Should I stay or should I go? Eukaryotic translation initiation factors 1 and 1A control start codon recognition.我该留下还是离开?真核生物翻译起始因子1和1A控制起始密码子识别。
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7
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