Kazan Institute of Biochemistry and Biophysics, Kazan, Russia.
J Am Chem Soc. 2010 Sep 1;132(34):11850-3. doi: 10.1021/ja103582n.
For the first time, we have demonstrated the site-resolved measurement of reliable (i.e., free of interfering effects) (15)N R(1rho) relaxation rates from a solid protein to extract dynamic information on the microsecond time scale. (15)N R(1rho) NMR relaxation rates were measured as a function of the residue number in a (15)N,(2)H-enriched (with 10-20% back-exchanged protons at labile sites) microcrystalline SH3 domain of chicken alpha-spectrin. The experiments were performed at different temperatures and at different spin-lock frequencies, which were realized by on- and off-resonance spin-lock irradiation. The results obtained indicate that the interfering spin-spin contribution to the R(1rho) rate in a perdeuterated protein is negligible even at low spin-lock fields, in contrast to the case for normal protonated samples. Through correlation plots, the R(1rho) rates were compared with previous data for the same protein characterizing different kinds of internal mobility.
我们首次通过对固态蛋白质进行局部位点分辨测量,得到了可靠的(即不存在干扰效应)的(15)N R(1rho)弛豫率,从而提取出微秒时间尺度上的动力学信息。(15)N R(1rho)NMR 弛豫率作为残基编号的函数进行了测量,该编号来自鸡α- spectrin 的(15)N,(2)H-丰富(在不稳定部位有 10-20%回补质子)的微晶体 SH3 结构域。实验在不同温度和不同自旋锁定频率下进行,这些频率是通过在和不在共振的自旋锁定辐照来实现的。结果表明,在低自旋锁定场下,即使对于全氘化的蛋白质,自旋-自旋干扰对 R(1rho)速率的贡献也可以忽略不计,这与正常质子化样品的情况形成对比。通过相关图,将 R(1rho)速率与用于表征不同内部流动性的相同蛋白质的先前数据进行了比较。